RNA id: AMCG00013825


Basic Information

Item Value
RNA id AMCG00013825
length 306
RNA type mRNA
GC content 0.54
exon number 2
gene id AMCG00013825
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 44004877 ~ 44006633 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CACGTCAAAGCTGGGACCTGTGAAGTCATCGCTGCACACCGCTGCTGCAACAAGAACAAGATAGAGGAAAGATCTCAAACGGTCAAGTGCTCCTGTTTCCCGGGCCAGGTCGCTGGGACTACGAGGGCCGCCCCTTCGTGTGTTGACGGTAGGTTCGATCGTCTTTCAATCCCTCCGGCAATCGCTTCAATAGTTGCCCAGAAATGGTGGTGCCAAATGCATCCTTGTCTCGATGGAGAGGAGTGTAAGGTATTGCCGGATCTCACCGGCTGGAGCTGCAGTACAGGAAACAAAGTCAAGACGACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU58656 lncRNA downstream 84915 43919661 ~ 43919962 (-) True G47041
TU58613 lncRNA downstream 391626 43609361 ~ 43613251 (-) False AMCG00013820
TU58590 lncRNA downstream 437882 43566795 ~ 43566995 (-) True G46990
TU58579 lncRNA downstream 481995 43522328 ~ 43522882 (-) True G46982
TU58412 lncRNA downstream 934704 43069972 ~ 43070173 (-) True G46855
TU58676 lncRNA upstream 109607 44116240 ~ 44123206 (-) True G47055
TU58707 lncRNA upstream 119133 44125766 ~ 44148931 (-) True G47082
TU58721 lncRNA upstream 215753 44222386 ~ 44223384 (-) True G47096
TU58735 lncRNA upstream 282422 44289055 ~ 44291787 (-) True G47109
TU58743 lncRNA upstream 490353 44496986 ~ 44497305 (-) True G47117
AMCG00013822 mRNA downstream 293882 43703998 ~ 43710995 (-) True AMCG00013822
AMCG00013823 mRNA downstream 304736 43694907 ~ 43700141 (-) True AMCG00013823
AMCG00013820 mRNA downstream 390298 43609282 ~ 43614579 (-) True AMCG00013820
AMCG00013819 mRNA downstream 411411 43569566 ~ 43593466 (-) True AMCG00013819
AMCG00013813 mRNA downstream 455631 43538890 ~ 43549246 (-) True AMCG00013813
AMCG00013828 mRNA upstream 154019 44160652 ~ 44177626 (-) True AMCG00013828
AMCG00013831 mRNA upstream 179379 44186012 ~ 44202447 (-) True AMCG00013831
AMCG00013830 mRNA upstream 235882 44242515 ~ 44256042 (-) True AMCG00013830
AMCG00013832 mRNA upstream 285215 44291848 ~ 44316684 (-) True AMCG00013832
AMCG00013835 mRNA upstream 664455 44671088 ~ 44677499 (-) True AMCG00013835
TU58280 other downstream 1303809 42699506 ~ 42701068 (-) True G46742
TU57875 other downstream 3396349 40603601 ~ 40608528 (-) True G46423
TU57869 other downstream 3417485 40586816 ~ 40587392 (-) True G46418
TU57809 other downstream 3576252 40386061 ~ 40428625 (-) True AMCG00013730
TU57766 other downstream 3729779 40273391 ~ 40275098 (-) True G46333
TU58927 other upstream 1616605 45623238 ~ 45623895 (-) True G47261
TU59115 other upstream 1917289 45923922 ~ 45924348 (-) False AMCG00013882
TU59142 other upstream 1957258 45963891 ~ 45974311 (-) True AMCG00013883
TU59204 other upstream 2068796 46075429 ~ 46083542 (-) True AMCG00013890
TU59251 other upstream 2153906 46160539 ~ 46163487 (-) True G47501

Expression Profile