RNA id: TU124839



Basic Information


Item Value
RNA id TU124839
length 420
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G99941
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 17905037 ~ 17905456 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTGGAAGTACCTTTGCCCACTTGACAACTCGGATCATCTGTTTTCCTGCTAGCTGATTTAGACTGGAGAGCAGGTGGTCTGTGGTGTCTGGTTGGCTGTTGTCATACCCTGCATAAACAATTTCTGGCTCGACGATTTCCAGGATGCTGCAGATGGACGGAGCCAGGTATGGCGTCACACCTGGTACGTGAGGGACCAGGGTGGTACTGGCACTCAAGTCCTTTTCTGTAGCCAAATACGTCTGGCCTTCCTTTGGGCTCTGAAGTTGCTGCTCCTCACTCACTCCTTTTAATTTCCCAAGCTTCTTTGACTTCCGTGctgcaaacacaaaatgacaTCGCAATTGCATCAACTGAAATAAAGCAAGCCAAAGCTGTATTGCTGTGCGAACAAATCTTTTGAGGTATGGTTTTCCAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU124835 lncRNA downstream 101118 17802158 ~ 17803919 (-) True G99937
TU124834 lncRNA downstream 105540 17797309 ~ 17799497 (-) True G99936
TU124821 lncRNA downstream 200457 17648051 ~ 17704580 (-) True G99923
TU124745 lncRNA downstream 769854 17134927 ~ 17135183 (-) True G99860
TU124706 lncRNA downstream 900624 17001994 ~ 17004413 (-) True G99830
TU124840 lncRNA upstream 27544 17933000 ~ 17933328 (-) True G99942
TU124847 lncRNA upstream 47302 17952758 ~ 17957487 (-) True G99944
TU124844 lncRNA upstream 49551 17955007 ~ 17957487 (-) False G99944
TU124906 lncRNA upstream 238820 18144276 ~ 18144517 (-) True G99997
TU124934 lncRNA upstream 439778 18345234 ~ 18399021 (-) True G100019
AMCG00015713 mRNA downstream 357541 17523279 ~ 17547496 (-) True AMCG00015713
AMCG00015711 mRNA downstream 416435 17337333 ~ 17488602 (-) True AMCG00015711
AMCG00015712 mRNA downstream 572306 17331652 ~ 17332731 (-) True AMCG00015712
AMCG00015704 mRNA downstream 773262 17127907 ~ 17131775 (-) True AMCG00015704
AMCG00015702 mRNA downstream 886655 17006122 ~ 17018382 (-) True AMCG00015702
AMCG00015717 mRNA upstream 65664 17971120 ~ 18028970 (-) True AMCG00015717
AMCG00015718 mRNA upstream 141735 18047191 ~ 18055915 (-) True AMCG00015718
AMCG00015719 mRNA upstream 165844 18071300 ~ 18072718 (-) True AMCG00015719
AMCG00015720 mRNA upstream 197218 18102674 ~ 18121761 (-) True AMCG00015720
AMCG00015721 mRNA upstream 531727 18437183 ~ 18437479 (-) True AMCG00015721
TU124837 other downstream 67095 17837580 ~ 17837942 (-) True G99939
TU124562 other downstream 1369569 16529377 ~ 16535468 (-) True AMCG00015691
TU124478 other downstream 1682882 16221765 ~ 16222155 (-) True G99646
TU124430 other downstream 1802581 16017583 ~ 16102456 (-) True G99605
TU124288 other downstream 2201747 15701078 ~ 15703290 (-) True AMCG00015666
TU124970 other upstream 722887 18628343 ~ 18630665 (-) False AMCG00015723
TU125314 other upstream 2069500 19974956 ~ 19976069 (-) False AMCG00015752
TU125431 other upstream 2364373 20269829 ~ 20279644 (-) False AMCG00015761
TU126211 other upstream 7087497 24992953 ~ 25000890 (-) True G101067
TU126708 other upstream 10256381 28161837 ~ 28257732 (-) True G101456

Expression Profile