RNA id: TU124955


Basic Information

Item Value
RNA id TU124955
length 279
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G100038
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 18516451 ~ 18516729 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tttcaccctgttctcctctgaatcattcagatgttcgttggcaaacttcagacgagCCTggacatgtgctttcttgagcagggggaccttgcgggcgctgcaggatttcagtccttcacggcgtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaggatcctcccgtgtagttctgggctgattcctcaccgttctcatggtcattgaaactccacgaggtgagatcttacATGGAGCCCCAGAGCGAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124934 lncRNA downstream 117430 18345234 ~ 18399021 (-) True G100019
TU124906 lncRNA downstream 371934 18144276 ~ 18144517 (-) True G99997
TU124847 lncRNA downstream 558964 17952758 ~ 17957487 (-) True G99944
TU124844 lncRNA downstream 558964 17955007 ~ 17957487 (-) False G99944
TU124840 lncRNA downstream 583123 17933000 ~ 17933328 (-) True G99942
TU124956 lncRNA upstream 43986 18560715 ~ 18560947 (-) True G100039
TU124957 lncRNA upstream 74723 18591452 ~ 18598196 (-) True G100040
TU125050 lncRNA upstream 219727 18736456 ~ 18737039 (-) True G100102
TU125060 lncRNA upstream 282841 18799570 ~ 18806676 (-) True G100109
TU125149 lncRNA upstream 615631 19132360 ~ 19132566 (-) True G100185
AMCG00015722 mRNA downstream 77302 18437740 ~ 18439149 (-) True AMCG00015722
AMCG00015721 mRNA downstream 78972 18437183 ~ 18437479 (-) True AMCG00015721
AMCG00015720 mRNA downstream 394690 18102674 ~ 18121761 (-) True AMCG00015720
AMCG00015719 mRNA downstream 443733 18071300 ~ 18072718 (-) True AMCG00015719
AMCG00015718 mRNA downstream 460536 18047191 ~ 18055915 (-) True AMCG00015718
AMCG00015724 mRNA upstream 84503 18601232 ~ 18617687 (-) True AMCG00015724
AMCG00015723 mRNA upstream 110876 18627605 ~ 18630136 (-) True AMCG00015723
AMCG00015729 mRNA upstream 223331 18740060 ~ 18770335 (-) True AMCG00015729
AMCG00015730 mRNA upstream 258631 18775360 ~ 18783878 (-) True AMCG00015730
AMCG00015732 mRNA upstream 313338 18830067 ~ 18839249 (-) True AMCG00015732
TU124837 other downstream 678509 17837580 ~ 17837942 (-) True G99939
TU124562 other downstream 1980983 16529377 ~ 16535468 (-) True AMCG00015691
TU124478 other downstream 2294296 16221765 ~ 16222155 (-) True G99646
TU124430 other downstream 2413995 16017583 ~ 16102456 (-) True G99605
TU124288 other downstream 2813161 15701078 ~ 15703290 (-) True AMCG00015666
TU124970 other upstream 111614 18628343 ~ 18630665 (-) False AMCG00015723
TU125314 other upstream 1458227 19974956 ~ 19976069 (-) False AMCG00015752
TU125431 other upstream 1753100 20269829 ~ 20279644 (-) False AMCG00015761
TU126211 other upstream 6476224 24992953 ~ 25000890 (-) True G101067
TU126708 other upstream 9645108 28161837 ~ 28257732 (-) True G101456

Expression Profile