RNA id: TU127206


Basic Information

Item Value
RNA id TU127206
length 351
RNA type TUCP
GC content 0.48
exon number 2
gene id G101853
representative False

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 30641194 ~ 30724429 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atcctatccagtctgtttttgaatgttcccaaatcgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127183 lncRNA downstream 323579 30394051 ~ 30396242 (-) True AMCG00015942
TU127184 lncRNA downstream 323579 30394051 ~ 30396242 (-) False AMCG00015942
TU127171 lncRNA downstream 380093 30336087 ~ 30339728 (-) False G101828
TU127172 lncRNA downstream 380093 30336087 ~ 30339728 (-) True G101828
TU127049 lncRNA downstream 744097 29975393 ~ 29975724 (-) True G101728
TU127209 lncRNA upstream 22140 30746569 ~ 30746808 (-) True G101855
TU127213 lncRNA upstream 30458 30754887 ~ 30760424 (-) True G101859
TU127269 lncRNA upstream 167899 30892328 ~ 30970887 (-) False G101911
TU127270 lncRNA upstream 242263 30966692 ~ 30970887 (-) True G101911
TU127354 lncRNA upstream 949055 31673484 ~ 31674526 (-) False AMCG00015962
AMCG00015945 mRNA downstream 247393 30465368 ~ 30472428 (-) True AMCG00015945
AMCG00015944 mRNA downstream 269667 30437497 ~ 30450154 (-) True AMCG00015944
AMCG00015943 mRNA downstream 300104 30400376 ~ 30419717 (-) True AMCG00015943
AMCG00015942 mRNA downstream 323514 30394055 ~ 30396307 (-) False AMCG00015942
AMCG00015939 mRNA downstream 354845 30354516 ~ 30364976 (-) True AMCG00015939
AMCG00015946 mRNA upstream 24605 30749034 ~ 30766107 (-) True AMCG00015946
AMCG00015947 mRNA upstream 79660 30804089 ~ 30823051 (-) True AMCG00015947
AMCG00015948 mRNA upstream 127392 30851821 ~ 30866786 (-) True AMCG00015948
AMCG00015950 mRNA upstream 294182 31018611 ~ 31061728 (-) True AMCG00015950
AMCG00015951 mRNA upstream 398239 31122668 ~ 31130956 (-) True AMCG00015951
TU127089 other downstream 551573 30166026 ~ 30168248 (-) True AMCG00015936
TU126809 other downstream 1613661 29104229 ~ 29106160 (-) True G101540
TU126708 other downstream 2462089 28161837 ~ 28257732 (-) True G101456
TU126211 other downstream 5718931 24992953 ~ 25000890 (-) True G101067
TU125431 other downstream 10440177 20269829 ~ 20279644 (-) False AMCG00015761
TU127273 other upstream 332338 31056767 ~ 31085062 (-) False AMCG00015950
TU127284 other upstream 447478 31171907 ~ 31175745 (-) False AMCG00015955
TU127312 other upstream 542975 31267404 ~ 31287793 (-) True G101939
TU127348 other upstream 904819 31629248 ~ 31629566 (-) True G101963
TU127411 other upstream 1184060 31908489 ~ 31945175 (-) True G102017

Expression Profile