RNA id: TU41992



Basic Information


Item Value
RNA id TU41992
length 252
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G33521
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17057586 ~ 17058220 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tttttgtaatcattttcttttttttttttttacattctaaCCTCTGCCGTCATCCTGGCCATCCTGTCCGGCGGTACGTTTCCACAGAGGACGTTCCTCCTCAGGTTTGGGTTCTTGGCATCTTTCAGATTCGCAATTCGGCTCCGTACCCTGTTCTTGTATTTCATGTCAGTGTTTTTGAATTCCTGAAAGATGCAGTCCTCTATCTGGGCTCCAAGTTCATCACAATCGGCACCAATGGCAATGTGGTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU41941 lncRNA upstream 256659 16798149 ~ 16800927 (+) True G33474
TU41910 lncRNA upstream 553510 16496841 ~ 16504076 (+) True G33448
TU41906 lncRNA upstream 566533 16488871 ~ 16491053 (+) True G33444
TU41880 lncRNA upstream 691244 16366114 ~ 16366342 (+) True G33422
TU41864 lncRNA upstream 956427 16100958 ~ 16101159 (+) True G33408
TU42066 lncRNA downstream 257453 17315673 ~ 17320035 (+) True G33585
TU42100 lncRNA downstream 364404 17422624 ~ 17424898 (+) False G33615
TU42102 lncRNA downstream 364404 17422624 ~ 17424898 (+) True G33615
TU42111 lncRNA downstream 364404 17422624 ~ 17424898 (+) False G33615
TU42132 lncRNA downstream 372733 17430953 ~ 17432628 (+) True G33634
AMCG00019361 mRNA upstream 7411 17044096 ~ 17050175 (+) True AMCG00019361
AMCG00019365 mRNA upstream 201304 16493467 ~ 16856282 (+) True AMCG00019365
AMCG00019354 mRNA upstream 791487 16240382 ~ 16266099 (+) True AMCG00019354
AMCG00019353 mRNA upstream 927146 15929875 ~ 16130440 (+) True AMCG00019353
AMCG00019350 mRNA upstream 1352506 15693042 ~ 15705080 (+) True AMCG00019350
AMCG00019368 mRNA downstream 17450 17075670 ~ 17078562 (+) True AMCG00019368
AMCG00019367 mRNA downstream 31849 17090069 ~ 17091118 (+) True AMCG00019367
AMCG00019369 mRNA downstream 61128 17119348 ~ 17120947 (+) True AMCG00019369
AMCG00019370 mRNA downstream 96650 17154870 ~ 17214411 (+) True AMCG00019370
AMCG00019374 mRNA downstream 157434 17215654 ~ 17216544 (+) True AMCG00019374
TU41862 other upstream 975643 16043942 ~ 16081943 (+) True G33406
TU41707 other upstream 1887745 15164348 ~ 15169841 (+) True G33283
TU41554 other upstream 2570880 14439253 ~ 14486706 (+) True G33159
TU40734 other upstream 6648089 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 7428924 9369898 ~ 9628662 (+) True G32293
TU42780 other downstream 3549254 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 3549254 20607474 ~ 20610889 (+) True G34170
TU42785 other downstream 3549254 20607474 ~ 20610889 (+) False G34170
TU43058 other downstream 5557403 22615623 ~ 22625205 (+) False AMCG00019475
TU43194 other downstream 6613905 23672125 ~ 23695801 (+) True G34511

Expression Profile