RNA id: TU74813


Basic Information

Item Value
RNA id TU74813
length 328
RNA type TUCP
GC content 0.45
exon number 1
gene id G59806
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3479782 ~ 3480109 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aatgaccaccatgtacccatcctctgatggctacttccagcaggataatgcaccatgtcacaaaggtcgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacaggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaa

Function

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74466 lncRNA downstream 904112 2574804 ~ 2575670 (-) True G59556
TU74368 lncRNA downstream 1258588 2195803 ~ 2221194 (-) True G59485
TU74366 lncRNA downstream 1274017 2195803 ~ 2205765 (-) False G59485
TU74365 lncRNA downstream 1287235 2192334 ~ 2192547 (-) True G59484
TU74290 lncRNA downstream 1817603 1605102 ~ 1662179 (-) True G59414
TU74817 lncRNA upstream 10609 3490718 ~ 3491049 (-) True G59810
TU74835 lncRNA upstream 117096 3597205 ~ 3597760 (-) True G59825
TU74837 lncRNA upstream 159929 3640038 ~ 3642114 (-) True G59827
TU74836 lncRNA upstream 165930 3646039 ~ 3647334 (-) True G59826
TU74865 lncRNA upstream 190914 3671023 ~ 3675014 (-) True G59852
AMCG00019944 mRNA downstream 100185 3340802 ~ 3379597 (-) True AMCG00019944
AMCG00019945 mRNA downstream 152031 3323779 ~ 3327751 (-) True AMCG00019945
AMCG00019938 mRNA downstream 221945 3255212 ~ 3257837 (-) True AMCG00019938
AMCG00019941 mRNA downstream 268619 3207887 ~ 3211163 (-) True AMCG00019941
AMCG00019943 mRNA downstream 278573 3194777 ~ 3201209 (-) True AMCG00019943
AMCG00019947 mRNA upstream 16167 3496276 ~ 3497746 (-) True AMCG00019947
AMCG00019946 mRNA upstream 43179 3523288 ~ 3529636 (-) True AMCG00019946
AMCG00019950 mRNA upstream 194998 3675107 ~ 3706097 (-) True AMCG00019950
AMCG00019949 mRNA upstream 242786 3722895 ~ 3728526 (-) True AMCG00019949
AMCG00019952 mRNA upstream 626888 4106997 ~ 4133823 (-) True AMCG00019952
TU74745 other downstream 296716 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 296716 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 368435 3107801 ~ 3111347 (-) True G59720
TU74667 other downstream 445447 3031856 ~ 3034335 (-) True G59712
TU74449 other downstream 972762 2494899 ~ 2507020 (-) True G59545
TU75113 other upstream 1532335 5012444 ~ 5061277 (-) True AMCG00019976
TU75216 other upstream 1783805 5263914 ~ 5265925 (-) True G60118
TU75221 other upstream 1796553 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 1811481 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 2970513 6450622 ~ 6453598 (-) False AMCG00020017

Expression Profile