Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019993 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 5276662 ~ 5278291 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019993 | False | 273 | mRNA | 0.44 | 2 | 5276664 | 5277926 |
| TU75221 | True | 838 | TUCP | 0.43 | 3 | 5276662 | 5278291 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019987 | NA | coding | downstream | 42208 | 5234230 ~ 5234454 (-) |
| AMCG00019984 | LOC102792584 | coding | downstream | 46524 | 5207773 ~ 5230138 (-) |
| AMCG00019985 | sptan1 | coding | downstream | 69782 | 5167366 ~ 5206880 (-) |
| AMCG00019982 | NA | coding | downstream | 117342 | 5158359 ~ 5159320 (-) |
| AMCG00019983 | NA | coding | downstream | 123609 | 5132046 ~ 5153053 (-) |
| AMCG00019989 | NA | coding | upstream | 19162 | 5297453 ~ 5301869 (-) |
| AMCG00019990 | NA | coding | upstream | 97575 | 5375866 ~ 5380964 (-) |
| AMCG00019994 | rgs3a | coding | upstream | 290227 | 5568518 ~ 5574686 (-) |
| AMCG00019996 | NA | coding | upstream | 326152 | 5604443 ~ 5615456 (-) |
| AMCG00019995 | NA | coding | upstream | 410240 | 5688531 ~ 5709863 (-) |
| G60102 | NA | non-coding | downstream | 109372 | 5166359 ~ 5167290 (-) |
| G60101 | NA | non-coding | downstream | 111174 | 5165267 ~ 5165488 (-) |
| G60100 | NA | non-coding | downstream | 112667 | 5163764 ~ 5163995 (-) |
| G60099 | NA | non-coding | downstream | 114141 | 5162006 ~ 5162521 (-) |
| G60088 | set,LOC105014167,LOC100696975,LOC102777863,LOC107083999 | non-coding | downstream | 119469 | 5153058 ~ 5157193 (-) |
| G60179 | NA | non-coding | upstream | 193028 | 5471319 ~ 5523619 (-) |
| G60230 | NA | non-coding | upstream | 712654 | 5990945 ~ 5991184 (-) |
| G60231 | NA | non-coding | upstream | 717178 | 5995469 ~ 5995688 (-) |
| G60235 | NA | non-coding | upstream | 758274 | 6036565 ~ 6040665 (-) |
| G60237 | NA | non-coding | upstream | 777258 | 6055549 ~ 6055822 (-) |
| G60118 | NA | other | downstream | 10737 | 5263914 ~ 5265925 (-) |
| AMCG00019976 | fam102a,LOC105891604,LOC108430372,LOC103389177 | other | downstream | 215150 | 5012444 ~ 5061512 (-) |
| G59806 | NA | other | downstream | 1796553 | 3479782 ~ 3480109 (-) |
| AMCG00019942 | NA | other | downstream | 2090697 | 3166237 ~ 3185965 (-) |
| G59720 | NA | other | downstream | 2165315 | 3107801 ~ 3111347 (-) |
| AMCG00019992 | NA | other | upstream | 13299 | 5291590 ~ 5292673 (-) |
| AMCG00020002 | edf1,LOC106563255,LOC105015108,LOC100194632 | other | upstream | 881286 | 6159577 ~ 6172474 (-) |
| AMCG00020017 | arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 | other | upstream | 1172331 | 6450622 ~ 6461428 (-) |
| G60348 | NA | other | upstream | 1185257 | 6463548 ~ 6466586 (-) |
| AMCG00020019 | NA | other | upstream | 1188980 | 6467271 ~ 6471434 (-) |
