RNA id: AMCG00021311


Basic Information

Item Value
RNA id AMCG00021311
length 342
RNA type mRNA
GC content 0.58
exon number 3
gene id AMCG00021311
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 14066606 ~ 14073961 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGGAGGGATATCCTTCCTCTCTCCGGTCGGTGGGTCTGTTGTCCGGATACGACTCCTGGCCCCAGGCTGGTGTGATCCTTTTCCTTCTTGCCGTCCTCGTCTCGTCGGCGGTATGTGTTCTCCACTTCGTGGCGATCCCTCCTCCTCCGCCGCTCCTCATCCTGCCGTCTTATGCGCTCCTTCTCTTTCTGTCGCCTGTCTCGGTCTCGGTCACGGTCCCGGTCCACATCCCGCTCTCTGTAGTCCTTACGGCCATCCTCATCTACCCTGCAAATCGCAAATTGTCCAGTGTGAGAGACCCACATGTAGAGGCCACTGGGGATCACAGAGACACATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106209 lncRNA downstream 3813 14057920 ~ 14062793 (-) False AMCG00021304
TU106163 lncRNA downstream 29961 14034224 ~ 14036645 (-) True G85091
TU106161 lncRNA downstream 32606 14029690 ~ 14034000 (-) True G85089
TU106125 lncRNA downstream 98224 13968135 ~ 13968382 (-) True G85059
TU106124 lncRNA downstream 99696 13965936 ~ 13966910 (-) True G85058
TU106403 lncRNA upstream 475631 14549592 ~ 14554392 (-) True G85251
TU106493 lncRNA upstream 967102 15041063 ~ 15043903 (-) True G85332
TU106657 lncRNA upstream 1245137 15319098 ~ 15378748 (-) True G85456
TU106676 lncRNA upstream 1307391 15381352 ~ 15383931 (-) True G85471
TU106674 lncRNA upstream 1357081 15431042 ~ 15432371 (-) True G85470
AMCG00021304 mRNA downstream 3813 14057918 ~ 14062793 (-) False AMCG00021304
AMCG00021303 mRNA downstream 18910 14046035 ~ 14047696 (-) True AMCG00021303
AMCG00021298 mRNA downstream 25717 14037233 ~ 14040889 (-) True AMCG00021298
AMCG00021300 mRNA downstream 53446 14000596 ~ 14013160 (-) True AMCG00021300
AMCG00021299 mRNA downstream 102395 13954051 ~ 13964211 (-) True AMCG00021299
AMCG00021309 mRNA upstream 257 14074218 ~ 14075345 (-) True AMCG00021309
AMCG00021310 mRNA upstream 2304 14076265 ~ 14106859 (-) True AMCG00021310
AMCG00021308 mRNA upstream 44127 14118088 ~ 14124529 (-) True AMCG00021308
AMCG00021307 mRNA upstream 51693 14125654 ~ 14137967 (-) True AMCG00021307
AMCG00021316 mRNA upstream 73959 14147920 ~ 14167490 (-) True AMCG00021316
TU106219 other downstream 14709 14049974 ~ 14051897 (-) True G85115
TU106093 other downstream 148738 13869939 ~ 13917868 (-) True G85037
TU105989 other downstream 438859 13627335 ~ 13627747 (-) True G84952
TU105842 other downstream 1265020 12719864 ~ 12801586 (-) True AMCG00021259
TU105805 other downstream 1538912 12527093 ~ 12527694 (-) True G84814
TU106928 other upstream 2167043 16241004 ~ 16242655 (-) False AMCG00021387
TU107075 other upstream 2573178 16647139 ~ 16649825 (-) False AMCG00021412
TU107077 other upstream 2573178 16647139 ~ 16649825 (-) True AMCG00021412
TU107277 other upstream 3224919 17298880 ~ 17303470 (-) False AMCG00021435
TU107289 other upstream 3345643 17419604 ~ 17423418 (-) True G85953

Expression Profile