RNA id: AMCG00021303


Basic Information

Item Value
RNA id AMCG00021303
length 645
RNA type mRNA
GC content 0.39
exon number 4
gene id AMCG00021303
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 14046035 ~ 14047696 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGACAGCGCAGACAAACTGAACAAGGAAGCTTCTACCTTAATAGACATTGCTCTGGAAAATGCACAGAATTACCTTATACACAGTGATCAATCCGAAAAAGGTAGTGAACACGAAATCAAAAATCAATCTAATCTAATGCAATTCATGTCTtcatatattgttgttgttccttgCAAACCgacattctttattttaattttagaaaccACAGATTATCAGATGAATAATATTGACTGGATTACCTGCAAGGATTTTACAATAGAGAGGGCAATGAATCAAATTGAAGAATATATTTCTGTAATTCGAAATCTCGCTTCGCAGACTTGGGAATTGCACTCCAGTTGGCTTCACAACCTGGTGTTCCTCCAGGAAAAAGACCTGGATTTCTGCACACAGTATCATTACAGAGTGCAGTGGAGCATCCCTACTAGAAGACAACCAATTCCAAAGGCCACAGCTTGTGTCTATTTCATCATCGAGATCTCGAAGATCAAACCACAGACCTTGCCTGTAGAAGTGTGCTATCTTGTGGAATCAAACCAGCTGTTGCACAGGCCAGGAAAAACAAGGTTCAGAGAAAAATGGCTGAAAGATGTAATTGAAAGCAAGACTATTCTACAGGAAACTGTCGATTTCTAA

Function

GO: NA

KEGG:

id description
K16530 AKAP14; A-kinase anchor protein 14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106163 lncRNA downstream 9390 14034224 ~ 14036645 (-) True G85091
TU106161 lncRNA downstream 12035 14029690 ~ 14034000 (-) True G85089
TU106125 lncRNA downstream 77653 13968135 ~ 13968382 (-) True G85059
TU106124 lncRNA downstream 79125 13965936 ~ 13966910 (-) True G85058
TU106113 lncRNA downstream 96215 13948307 ~ 13949820 (-) True AMCG00021302
TU106209 lncRNA upstream 10224 14057920 ~ 14062793 (-) False AMCG00021304
TU106213 lncRNA upstream 10224 14057920 ~ 14071206 (-) True AMCG00021304
TU106210 lncRNA upstream 21647 14069343 ~ 14071206 (-) False AMCG00021304
TU106212 lncRNA upstream 21647 14069343 ~ 14071206 (-) False AMCG00021304
TU106214 lncRNA upstream 21647 14069343 ~ 14071206 (-) False AMCG00021304
AMCG00021298 mRNA downstream 5146 14037233 ~ 14040889 (-) True AMCG00021298
AMCG00021300 mRNA downstream 32875 14000596 ~ 14013160 (-) True AMCG00021300
AMCG00021299 mRNA downstream 81824 13954051 ~ 13964211 (-) True AMCG00021299
AMCG00021302 mRNA downstream 94991 13948952 ~ 13951044 (-) False AMCG00021302
AMCG00021301 mRNA downstream 107877 13930836 ~ 13938158 (-) True AMCG00021301
AMCG00021304 mRNA upstream 10222 14057918 ~ 14062793 (-) False AMCG00021304
AMCG00021311 mRNA upstream 18910 14066606 ~ 14073961 (-) True AMCG00021311
AMCG00021309 mRNA upstream 26522 14074218 ~ 14075345 (-) True AMCG00021309
AMCG00021310 mRNA upstream 28569 14076265 ~ 14106859 (-) True AMCG00021310
AMCG00021308 mRNA upstream 70392 14118088 ~ 14124529 (-) True AMCG00021308
TU106093 other downstream 128167 13869939 ~ 13917868 (-) True G85037
TU105989 other downstream 418288 13627335 ~ 13627747 (-) True G84952
TU105842 other downstream 1244449 12719864 ~ 12801586 (-) True AMCG00021259
TU105805 other downstream 1518341 12527093 ~ 12527694 (-) True G84814
TU104623 other downstream 7499458 6544492 ~ 6546577 (-) True G83864
TU106219 other upstream 2278 14049974 ~ 14051897 (-) True G85115
TU106928 other upstream 2193308 16241004 ~ 16242655 (-) False AMCG00021387
TU107075 other upstream 2599443 16647139 ~ 16649825 (-) False AMCG00021412
TU107077 other upstream 2599443 16647139 ~ 16649825 (-) True AMCG00021412
TU107277 other upstream 3251184 17298880 ~ 17303470 (-) False AMCG00021435

Expression Profile