RNA id: AMCG00021302


Basic Information

Item Value
RNA id AMCG00021302
length 408
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00021302
representative False

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13948307 ~ 13951044 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGTCCTGGGCTCTGGTCTACATTGTGGTCATCTTGTCCACCACAAGTTGCTctcaacccttcccactgtatTCAGGTACCAATCTGGTGCCTGCAGCAGATGTGTTCCAGAGGGGGGCCGCGGATAGTGAGGAACAGGAGCATACAGACAGCTCTCTGACAGACGACAGCAGACAGATAAAGAGCTTGCTGCCTCTGCTACTGCCACAGGGGCAGGACCCCCAGGCCACACTGAGGGACATCTGGCTGAAAGGCACCAAGGATTCCTCACAACAGGATAAGCTCAACAGCATGGTAAGAGTTGATGACATACAGGCAGCAGTGTTGAAGCTGGCGGCAGCTGAGAATCTACGGACACACAGCCTGCTCCGGTCTGACCAGAGCTCACCGAAAACCAAGAAGAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106104 lncRNA downstream 18671 13929842 ~ 13930281 (-) True G85044
TU106060 lncRNA downstream 86408 13858304 ~ 13862544 (-) True G85012
TU106061 lncRNA downstream 86480 13858304 ~ 13862472 (-) False G85012
TU106062 lncRNA downstream 86480 13860288 ~ 13862472 (-) False G85012
TU106057 lncRNA downstream 111879 13836587 ~ 13837073 (-) True G85009
TU106124 lncRNA upstream 14892 13965936 ~ 13966910 (-) True G85058
TU106125 lncRNA upstream 17091 13968135 ~ 13968382 (-) True G85059
TU106161 lncRNA upstream 78646 14029690 ~ 14034000 (-) True G85089
TU106163 lncRNA upstream 83180 14034224 ~ 14036645 (-) True G85091
TU106209 lncRNA upstream 106876 14057920 ~ 14062793 (-) False AMCG00021304
AMCG00021301 mRNA downstream 10794 13930836 ~ 13938158 (-) True AMCG00021301
AMCG00021290 mRNA downstream 24360 13896893 ~ 13924592 (-) True AMCG00021290
AMCG00021284 mRNA downstream 52677 13881140 ~ 13896275 (-) True AMCG00021284
AMCG00021288 mRNA downstream 161695 13775039 ~ 13787257 (-) True AMCG00021288
AMCG00021285 mRNA downstream 177541 13755695 ~ 13771411 (-) True AMCG00021285
AMCG00021299 mRNA upstream 3007 13954051 ~ 13964211 (-) True AMCG00021299
AMCG00021300 mRNA upstream 49552 14000596 ~ 14013160 (-) True AMCG00021300
AMCG00021298 mRNA upstream 86189 14037233 ~ 14040889 (-) True AMCG00021298
AMCG00021303 mRNA upstream 94991 14046035 ~ 14047696 (-) True AMCG00021303
AMCG00021304 mRNA upstream 106874 14057918 ~ 14062793 (-) False AMCG00021304
TU106093 other downstream 31084 13869939 ~ 13917868 (-) True G85037
TU105989 other downstream 321205 13627335 ~ 13627747 (-) True G84952
TU105842 other downstream 1147366 12719864 ~ 12801586 (-) True AMCG00021259
TU105805 other downstream 1421258 12527093 ~ 12527694 (-) True G84814
TU104623 other downstream 7402375 6544492 ~ 6546577 (-) True G83864
TU106219 other upstream 98930 14049974 ~ 14051897 (-) True G85115
TU106928 other upstream 2289960 16241004 ~ 16242655 (-) False AMCG00021387
TU107075 other upstream 2696095 16647139 ~ 16649825 (-) False AMCG00021412
TU107077 other upstream 2696095 16647139 ~ 16649825 (-) True AMCG00021412
TU107277 other upstream 3347836 17298880 ~ 17303470 (-) False AMCG00021435

Expression Profile