RNA id: TU8184


Basic Information

Item Value
RNA id TU8184
length 1559
lncRNA type sense_over
GC content 0.51
exon number 3
gene id si:dkeyp-80c12.8
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24218594 ~ 24221446 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

atagatagatagatagatagatagatagatagatagagagagagagagagagagagagagaagcatctaaagcatgtaaatattatgtctacactgaaaaaaagtataattttaacagtaaaaacactagacatttaatataattttacattaacatGCTGTcagttatttagtttttagaaGTAAACAGAACAAATCGATGTATGATTTACAGTCAAAAACTAaactgatactgcttgacacttcacatttgaaagcattttgcttaaataatcatgtttttaaatgctttcgTTATCGGTTGTGTGCATTTGGACATTATGTTAGgtcttttgttgtttaatgaatgtttattgcgcTATTTAAGTGTTACCATGTTTGAGCTTGGAGTCTTcttctgactttttctttcacatcCATTATTAAGGTCACTATCAgatacaaaatagtttttaatagcggtgtgcactgtaaaaatgtgattgcagtttttctgtattttttatttatttttattttttacaaaattattctgTCAACCGCAGCTGCAGAAATAGTTTTGTAAaaactacagtttttttttgttttgttagattCTCTTCTACAAGCCACGTTCACGTTCAGTTAACGATCCCATTATTTAAGTTTAGTAATGACGCACATGTCAGGACGGAAGAAACCTCCCACTGCCTGTTTAAAAGTGTCTTCTTGCAGTGTGAAAAACGTCCTTCGGCAGTCATCTTTTTGGTAAGAAACATGAAGGCGTTCTGCGCTGCTTGCATCCTGTCTCTTCTTACTCAAGGAATGGCACTGAAGTGTAACCTGTGCGTTTCCAAAGGGAACGGGGTCGCGTGCGCTCCATCGGTGCAGACGTGTCTTTCCCACATGATGGCCTGTGGAAACATCACATTTAGAGCCGTTTTGACGGCTCCACCTTCAATCCGTTCCTGCATAAGCATGTCGGCCTGCTTGAGCTACCTGCTCGCTCCAGAAGTGACGGCCGCGTGCTGCAGGACTGACCTCTGCAACTAAACCAACGAACCCGAGTCACCGAAGACGTACGCTTTAGCCCAACTCTACCTTTCCGTAATCGAACTACAACGACAACGATTTGCAAACGAAAACGTTACAAACAGCAATGGTGTGTAACTTTTAGCACGCTGCAATAAAAGCGGTCAGGCAGTGTCTGTTGTGGTCACACAAAATGtatcacttaaaaaaatttttggaGTTAATAATGAATAGTAAACGACATCTGGGGATGGAAAGTCAGCGTGTGGCtagatttatttttggcaggaagcaaaaaaataatgctgtgaGGAGATACCATGCCGAAACGCCGCCTTTTTTGGAAATACccgaataaataaaactttcagTGGACATAAACTCCATTAAACAGTTTTGGAAGTTACGTGATGTGCTTTACGACCACTGTAAAGGCAGCGAGTCTAACACAGGCGGCTTAAAATGAACCGAAATGAGGTCCACCCTGCCCGAAACGCGCGCGTCAGTCGCGACTCTTTTAAATGACTCGTTTTAAACgattcttttta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251604.1 lncRNA downstream 41249 24175891 ~ 24177649 (-) True LOC122350488
TU8175 lncRNA downstream 138788 24079049 ~ 24080110 (-) False LOC122351900
TU8166 lncRNA downstream 157686 24058013 ~ 24061212 (-) True LOC122351911
TU8186 lncRNA upstream 27886 24248672 ~ 24251212 (-) True atp5md
TU8274 lncRNA upstream 70647 24291433 ~ 24292264 (-) False LOC122341607
TU8381 lncRNA upstream 279607 24500393 ~ 24501238 (-) True G5763
XR_006253177.1 lncRNA upstream 282187 24502973 ~ 24508025 (-) False LOC122362739
TU8379 lncRNA upstream 282297 24503083 ~ 24505827 (-) False LOC122362739
XM_043248575.1 mRNA downstream 50262 24164545 ~ 24168636 (-) False LOC122351487
XM_043248568.1 mRNA downstream 50262 24167214 ~ 24168636 (-) True LOC122351487
XM_043227202.1 mRNA downstream 117609 24091408 ~ 24101289 (-) True LOC122330280
XM_043249314.1 mRNA downstream 136381 24061440 ~ 24082517 (-) True LOC122351900
XM_043239800.1 mRNA upstream 1337 24222123 ~ 24242004 (-) True gsk3bb
XM_043239814.1 mRNA upstream 29519 24250305 ~ 24251239 (-) False atp5md
XM_043252642.1 mRNA upstream 47292 24268078 ~ 24274231 (-) True zgc:175214
XM_043248280.1 mRNA upstream 54943 24275729 ~ 24278863 (-) True LOC122351310
XM_043235125.1 mRNA upstream 61103 24281889 ~ 24284486 (-) True zp3c
TU8153 other downstream 46836 24167112 ~ 24172062 (-) False G5624
TU8816 other upstream 647655 24868441 ~ 24870465 (-) True G6056
TU8851 other upstream 751705 24972491 ~ 24973371 (-) True G6073
TU8856 other upstream 767990 24988776 ~ 24993345 (-) True G6074
TU8865 other upstream 773697 24994483 ~ 24995820 (-) True G6078
TU8873 other upstream 805877 25026663 ~ 25028129 (-) False LOC122349000

Expression Profile