LOC122330280 (zgc:154142,LOC107676135,LOC107594422)


Basic Information

Item Value
gene id LOC122330280
gene name zgc:154142,LOC107676135,LOC107594422
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24091408 ~ 24101289 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227202.1
TACTGTGGCTATTCTTCACCTAAACCGATAGTGTCCTTAGgaaacagcatttttgtgtatttcgaCACCAATGACAGATACACAGAGAGAGGATTCAAAGCCCTGTACCGTGCTGTGGCCCCTGAGACAACGCCAGAAATAGTTGGGGCTGGTGGCGTTCTTCAAGGTGACCATGGGGAGCTGTTGACCCCCGGCTTTCCCTCACAAAACTACGAGAACGGCGCGCTCTACCAGTGGATGATACACGTACCTGATGGGGAAAAGGTCCGGCTAACATTCACAGCGTTTAACCTTGTCCCAGAATCATGTGGTGACTTTGTGGATGTCTATGACGGCGCTTCGGATGGTGCCGCCCAACTGGGTCGTTTCTGTGGAAACAGTCTCCCGGCTCCGATGTTGTCTAGTGGCAGTAGTATGGTGGTACGTTTCAAGTCTGATTCGAGCGTGACTGCCAAAGGCTTCAGTGCCACCTATACACTAGCTAGTGCCCCACCAGTTACAACCACTCCAAAGACCACAGGACCAACGATTACCACACCTGTCCAGACCCAAACACCTGCTCCAGAAGACTCTGGCTGTGGGTCCTCTGGGAAGCTGTCCGGACGTAAAGGTCAGATAAACTCCAAGAACTATCCTCGGGCTTATCCTGCAAACTTGAGGTGCTCTTGGGACATCTCAGTGGATGAAGGCTTTCTTGTCAAACTGCACATCACTGATCTGGCCATCGTGGGTGAGGCGGGCCAATGCGGCAAAGATAAACTCACCGTCACCGACAGTCAGCAGTCACTGGgcACACACTGTGGGTTTGTTCTTCCCCCGGTACTTATCAGTGTCAGCAACAACATGTCGCTAAGTTTCCAGTCAGACTCTCGGCTAACCGACCGTGGGTTCTCTGCCACATGGCAAGCTGTGTATCCAGAGGACCTTTCTGATATCCAGGGATGTGGAGGTTTCTCACAGGAGGAGACAGGCATCGTGAAGTCTCAAAACTGGCCCACGAACTATCCAGCTAACAGCATGTGTCTGTGGACCATACGCGTTCCCAAGGGGAAGACCATTAAATTGACGTTCACTCATTTTGACGTGGAAGAGGCTGGCATCCTTTTTGGCCAGTGCAATGACAACGTGGTAGTCTACGACGGAACACAACCTGGAGCGAAAAAATACGGGCCCTTTTGTGGCTCCAAAATCCCTGCCGTCATCGATAGCACAACCAATGAGCTTGTGATACGTTTCTTCGCCGACTTTTTCATCGAGGCCAAAGGTTTTCATGCACACTGGGCTACGGATTCCACGTTACCGACCCCGACTGAAGCTCCGGTGCCGCCCAACCCTTGGGATGACATCAAAATAGACTGGCCCGAGAGCTGCGGGAAGCCCACGATCCCTCCGGATGTCAACACTCGCATAGTGAATGGAGAACCTGCCAAAGCACACTCCTGGCCGTGGCAAGTATCCATGCAGGTTTTGCGTGATTCTGAGCCTTCGCCCAAATTCGGTCATACATGTGGAGGAACTCTCATCCATAAGAACTGGGTCCTGACAGCTGCTCACTGCTTCATCAGGttatatatagacatacatgcataaatacacacacacacacacacacacactacattgacaa

Function

symbol description
zgc:154142 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space.

NR:

description
PREDICTED: cubilin-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227202.1 True 1627 mRNA 0.51 10 24091408 24101289

Neighbor

gene id symbol gene type direction distance location
LOC122348966 LOC107675992,LOC107569046,LOC107729366 coding downstream 52752 24032892 ~ 24038656 (-)
neurl1aa neurl1,neurl1aa,LOC107676877,LOC107746052,LOC107746293,LOC107692176 coding downstream 888272 23152502 ~ 23203136 (-)
setd4 setd4,LOC107676883,LOC107560975,LOC107603051,LOC107746057,LOC107692116,LOC107746281,LOC107603006 coding downstream 1177800 22909995 ~ 22913608 (-)
si:dkey-22n8.3 NA coding downstream 1226717 22860868 ~ 22864691 (-)
pknox1.2 pknox1.2,LOC107560978,LOC107676856,LOC107603046,LOC107692119,LOC107718250,LOC107746279,LOC103022264 coding downstream 1230696 22851708 ~ 22860712 (-)
LOC122351487 LOC107675992,LOC107729366,LOC107569046 coding upstream 63256 24164545 ~ 24168636 (-)
gsk3bb si:dkeyp-80c12.7,gsk3b,LOC107729358,LOC107569048,LOC107675878,LOC107684292 coding upstream 120834 24222123 ~ 24242004 (-)
zgc:175214 zgc:175214,rn122,LOC107675969,LOC107684287,LOC108434705,LOC105891037 coding upstream 166789 24268078 ~ 24274231 (-)
LOC122351310 LOC107675897,LOC107574145,LOC107684327,LOC107706793,LOC107729342,LOC107684326 coding upstream 174440 24275729 ~ 24278863 (-)
zp3c NA coding upstream 180600 24281889 ~ 24284486 (-)
LOC122351911 NA non-coding downstream 30196 24058013 ~ 24061212 (-)
G5568 NA non-coding downstream 354515 23735976 ~ 23736893 (-)
G5583 NA non-coding downstream 355805 23733174 ~ 23735603 (-)
LOC122346633 NA non-coding downstream 377951 23708413 ~ 23713457 (-)
G5577 NA non-coding downstream 468527 23619700 ~ 23622881 (-)
LOC122350488 NA non-coding upstream 74602 24175891 ~ 24177649 (-)
G5763 NA non-coding upstream 399104 24500393 ~ 24501238 (-)
LOC122362739 gstcd,LOC107757010,LOC107684312,LOC107729368,LOC107676029 non-coding upstream 401684 24502973 ~ 24508467 (-)
G5769 NA non-coding upstream 450294 24551583 ~ 24551880 (-)
G5780 NA non-coding upstream 459550 24560839 ~ 24561453 (-)
LOC122351900 tcf7l2,lef1,LOC107750316,LOC107757012,LOC107684275,LOC107676173,LOC107594427 other downstream 8532 24061440 ~ 24082876 (-)
LOC122350023 LOC107675992,LOC107729366,LOC107569046 other downstream 49450 24037063 ~ 24041958 (-)
LOC122351696 LOC107729347,LOC107583214,LOC107566139,LOC107746059,LOC108434669,LOC106951888,LOC108258286,LOC106586852,LOC105012299 other downstream 174960 23771024 ~ 23916448 (-)
gja5b cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072 other downstream 1061098 23018238 ~ 23030310 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other downstream 1175003 22913900 ~ 22916405 (-)
atp5md taf5,LOC107676012,LOC107583167,LOC107574147,LOC107684290 other upstream 92432 24193721 ~ 24251239 (-)
si:dkeyp-80c12.8 NA other upstream 117305 24218594 ~ 24221446 (-)
LOC122341607 LOC107729348,LOC107676039,LOC107578077,LOC107729356,LOC107594453,LOC107676194,LOC107729349,LOC107706808 other upstream 190142 24291431 ~ 24297591 (-)
G6056 NA other upstream 767152 24868441 ~ 24870465 (-)
G6073 NA other upstream 871202 24972491 ~ 24973371 (-)

Expression


Co-expression Network