gja5b (cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072)


Basic Information

Item Value
gene id gja5b
gene name cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 23018238 ~ 23030310 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU7913
TTATaccaaacaatatattttatttgtcgtCCAACACCACAGCCCAGCCTTAGGAAGTGGTTCAGTACCAAATTCAATGGAGTTACACATGACGAGCATCAACACAGGAGGGGCAGGGACAAGAGGACAACCtattagctttttttctgtttttgttttaataatcatttgttttctacaaaaaaaaaaaaaagaaagaaaaatcccaCCCTCCAGTAGCTCAGATGTTGTCAGCGCTACACTGTATAGCTGTAcacagcaaagcaaaaaaaaaaaaaaaaagcttttcaatGTATTCCGCAGTGGTGGCAAACAGCGACAGCCTGACTGCAGTCCTTGTCGGACAGACACGGATATGCAGACAGTAGCCTGAGCGTCACTGCAGAACTGAGTGCTGCTGGTTTATGGGGTTCAAAAATGCCCCTCCACAGTCACCCTCACCTGTACCCAGACCAGCTTACAGAGGTTTCTAAAACAGGAACGGGAGACCACACTGCATACATCTGATTACTGCTCCTACTGACTGTCAAAGTGTTTTTctctacaattaaaaaaaaggagaaaagaaaacactttattcTTTACAGTTAATTcttgtttgtgcttttttaataatactatgATCTGTATGAGGTCTTAGTTTGGTTTTATCATACACTGGagtagcaaaaaaaattaaatttaaaatattctgtaCGCCCCACAGTACACAGTATTTTGTGGTGCTGTTGTGTCACCTACTGTCCACAAACAACCACCTCAATCCCCCCTTtacaaatgaagatgaaaaaaaaaaactatagaaatcACTGGTAGAATCCCTTTAACAACACaagtacagtacacacatacaaagaGCATTTCCTGTTTGGAGGGAAGTGATGCGATGAGATGTAAACATATAGCCAAGACGGTGCACCTTGTGACAAAATGTTCCTTGACTTTTCCACTTTCATGTCTATTGTTTCAGTTcttcgacttttttttttccaacaatcTTTCCTGGTTTCCAACTATGTATAAAAGTACAATGAAGCCCCTAGACGTTCATACTTGGTTTGCTGTAGACTTTACATGTGGCATCTTGTCCACAATGTCAAACAAATATCCTCGACACAAGTCGGTCTGGTAAATTCCATATACATTCCCAAGTTATCGAAAAAAAGTCCCTTCCAAACAGTGCCGGACCTGAGCCCAACTTTGAggaaagcaaaatttgcttctCACACTTCCACCTGTTAAATGACATTACCATTGCAGAAGATTCCCTGTGAACACATCCATGTGTATGTGACGGACACCCATCACTGTGTAAGCTATAAACCTTGCTCTAACCAGGTGTCAGGGTGTGTATGTGCACAGAAAATGTCCCAGTTTCCACACGTATCTGCTTGACAACATGgagtttctttttgtctttcgtTACGAAGGTTTTTATTTCACAGGTTACACAGTTTCCCAACTGTTCATAATGGTAGTGGAGGCTCAAAACATTATATTCCCAGGGTTTCCTGGGCCAGGGTTAAATCCCATGCCCATGTCTGCTGCCATTCCTCGAGGCCTCATCTGAGAGGGCATCATCATAGTCTGCTGAGGACCACTCATCCCTTGTAGTGACATCATCATGTTAGGAGAACCCACCGGGCCAGGGTGGTTGTACATCGGCCGTTCCTTTCCTTGCATCATTCCAGGTCCTCCCATCATTCCCGGCTGCTGGCCAGGAGACAACATCCTGTGCTGTGGCCCCATCATACCCTGACCCATGAAACCTGGGGGTCTCATGGGGTTGTGGCCTGGATTACCCATGGGCATGTCCTGTGGTCCCATATGTCCAGGGCCAGGAGGACCACCCATTCCCTGCATGGGGAGGCCCATCCTCGGATTGCCCTCACCCATCATCCCCTGCATTTGGGGAAAGCCAGGCGGGCCAGACGGGTGTGGTGGCTTCCCACCAGGGGCGTCTCCACCACGAGGGAAGTAGGAGAGAGTCTGGCTAGGCTTCTCTGAGGGGATAATTCGAGAGAGGTCAAACTCGGGGATACCTGACGCACCTGGTCGCATGACCTCATGTAGATCCGAGTCATTGAAGACCCCGGGCATATTATTAAACTCCTGGCCACCTGGAGTGTTAGGTTTACACATTCCTGGCTCACCACCCGGTCCATGAGGCATACTGCCCATCCTGCCCAGTGGAGGTGACTGTCCTGGAGGGAAGCCCTGTCCTCGGTGAGGAAGACCCATACGCCCCTGTGGCATCATCTGGGTGTTGCCCATGCCAGGGTCTTGAGAGACTGGGTTCATCATCATACCATGAGGCATCATGCCTGGGCCCATAGGCCCAGAGTGAGGAGGCATGTTGGGGCCCATGGGATTGGGCGAGGGCATCTGGTTTGGCATGCCATGGGAAAGTGGCTGGGAACCCATAGTGTTCATCCCCATTGGGCTGAGGGAAGGCATGGGGCCAGAAGAGTTGGGTGTCATCATTCGAGGATGACCTGGGTGATGATTCA
>XM_043235811.1
TGAGTATGAGGGCACTTCCAGATCGTCCATGACGGTGGTCGGCAAGCTAGCAGCTGTTTTTGATTATCAACAAGTCTTTAATCTGTCATCCCCTGACACTGAGAAGACAAGGACTCATCTAAAGAGAAGACTGAATTGATTGGTTTATTTGACACTAGACGAATCAGAGGACGCATACTGGGGTGAAACAACAGAGGTGAGCATCTATAAAAGACATTCATCTTTCTGTGCTCAAACCCCGAGAGCTAGAAACCACCACAGCGAGTCATCCATCAATTCCAGCTTTATCTTTGAAGGAAACGGCTTACGTTTCGTCAACTGGCATAATAAAGAGTCGATTTTCTCCATCGGTCTGTGGAAGGTACTGAGGACGAGAGGACAAGAAGCAATCTGTCTGCAAACAGCCTCGTGTCCGCATACTCGATCCTGTCAGGAAGAtacaagaggaagaaaaagagctGCAGCTCAATCACCTTGTTCCCACTGAGCTGTCGAGATACCTCCTTCAGCATCCCTACCAATAAGGCAGCATCGACGGTCTTGACTGTATTCCAGATCGTTCAACACTACAGTCACTGAACGTATGAACAGAACCATACATCACAGTGAAGCGGCTGAAGTTTGAAGGCCTCTGATGCTCGGCGGCTCTCAGTCGGCCAAGTAGTTCTGGTAACTAATACACTCTAAAAGCAGAAGAGACAGGAAGTGTTCTCAGGTGAAGGGGCAGAGCGAATCTGTCAAGATTCATCACTAAATAGCCAACTGTTTACCCACCATTTgacagagagacaaacacacacctgtcgGATCTTTAACAGACAACTGCTGGGCCACAACTATTAAAGGCTCTTCTGACTAATCATGGCTGACTGGAGTCTGCTGGGGAACTTTCTAGAAGAAGTCCAGGAACATTCCACCTCTGTGGGAAAGGTGTGGCTCACCATTCTCTTCATCTTTCGGATCCTGGTCCTGGGCACGGCCGCCGAGTCCTCGTGGGGCGACGAGCAGGAAGACTTCACCTGCGACACGGAGCAGCCCGGTTGCGAGAACGTTTGTTACGACCGAGCCTTCCCCATAGCGCATATCCGCTTCTGGGTGCTCCAGATTGTATTCGTATCCACACCTTCGCTCATCTACATGGGACACGCGATGCACAGTGTCCGcagagaggaaaagaggaggaaagagcaggaagaagaagaagaagatggagAGAAGTACCCAGAGAAAGATAAGAACTGTGGGAAGGAAGACGAAGGTGGAGGTGGGAAGGTGAGATTGAAGGGGGCTTTGCTACAAACCTACGTACTAAGCATCCTCATCCGCTCTGTAATGGAAGTGATATTCATCATGGTCCAGTACATGATCTACGGAATCTTCCTTAACGCGCTCTACGTGTGTAAGAGCCCTCCGTGTCCGCATCCCGTCAACTGCTACATCTCCAGACCTACAGAGAAGAAcgtgtttattgtgtttatgttGGCGGTAGCAGCTGTCTCGCTGCTGCTCAGTATCGTAGAACTCTATCATTTGGCGTGGAAGCAGGTTAAGGGTTGTTTGCGACGATATAAAGCTTCCAAACAGCGAACGAATACAACTTCCACCGTCGCTGCAGTCTCACCAAACCCGTCCACACCAAACAGAGCCTGCACTCCACCACCTGACTTCAACCAATGCCTGACATCCCCACCGTCTTCCCCTACCATACATACACGCGCGCACTCGCTCTTACACCCGACCTGCCCGCCTTTTCACGACCGACTGGAGCACCAGCAAAACTCGGCCAACATGGTCACCGAACGCCATCGAAGTCAAGACTACCTAGGGGTCAACTTCTTGagcttctcacacacacctacagAGACGCCCAACTCGTGCGCCTCGCCTTCGTTTCTGAGCAGCGATTTTGTTGAGGACAAGCGAAGGTTTAGCAAGAGCAGCGGGACCAGCAGCCGCATGAGACCGGATGACCTTGCAGTGTAGCGCTGGCCAATCGCATCTGGAAAAGCGTGATGAAGCTGCGACCTGATTTTGCACTCGACCCACTGCATTTACTTTATTGCTGTCTGATTGTCTGAGCCAGAATATCGGTTCACACATTTGCACAACTGCATGAAGATAACCATATATCTTTAATGTGCCTCTATTATTGCacatgaaaggttcatattttggttttgagattTTCTGGACAGGTTGACATGCGTCcgaagtaaaacaaaaacactttaattttcttctAATATGCGTTTAGTTTTACCTTATTTGCGAGTGAAGTGCTGCTTCGTGTACAGAGTTACCCGGGGAAACCGATATATTAAATGagccaaaagcagcacctagtggcaaagaacgaATTTAGAAAATACCAAGAAGTGGACAGGCAATATGCAGTGGTTTCAAGGGCATACTAATACAATAAGGGCacttaaagaaatgtatattaaaaaaaacaacacaaaatcaAGACTAtacatgcattataatatttcatgaaaatgGTGAAACTTGCTCGACCTCTGAAACATTGTCACTTTGCCTTTAGACTAATGCATTTGAAACAATCAAGCCAactttttactttgaaatacACCATATTACactactgttttactgtaataatgcACTGATGAGATGTTCTTCAATAAATTTTTTTCCTTATTGGTAAATGagattttatgttatatttgcTGAACCTGGCTGAGAAGAAAATGAACACGTTTCTGTGTCAAATGCATTTCTCAAATGGAAAACGGACATTGAGCTAACCATTTGAACTggacattttgcattttgaacaCTTACTGTGACTTCGCAACCGATTTTGATTGCGCAAGAAAGGACAATGGATAGACACGGATGCAATGGCATGCAAAAACTGAGTAATTTAAACTGATAATCTGGGGTGAAGAGCTCTTAAGCGGAGCACAGTTGTgtacagaaaatatgaaaagaaaaaaaggaatgtaatacaatgttgttgttttaaccTTTGCAGTCATTTGTAAttctatttgtaaaaatgtatgtacttgttattaattttaagtatcagagtttttgttattaatgcatcatttagtaaagataaaaaaaaaaaatgccagcatacatctatatacacacaaatacatactgaaatttcaaatcatgtcacaGCTACCACAAGGTGGCGCAATCACTCTCCATTACAATACATAGCTAGCCAGTAGTCTAACACATGGACTCTTCAGAATGCTCTGGGCAGGTGTTGTTATCCTGACACTGAAGTGCTTTACATTTCATGTTGGTGGATAAAAAAGCGAACTAGTCTCCTTGCAGCAGCTGCTAAATCTCAGCTAACCTCGGCTAAAATTAGCCCTGCAACGGAACGCATTCTCCACCATCGGTTCAAGAGCAACATGTGCTGGATCATTATTGCACCACAGCAAGATTTTGAAAGGATTTGCTGAGGTTCAAACCGGACTGGCTACTAATCTCTCAAGCGAGAACACACACCGAGATATgccgtttttaaaaagttatacaGAAGGCTATATAGAATCTGTAAAcaaatttgaaacatttcaaatcaaataagattttccatttacaaaaaaagagaaagttcaAAATGCTAATTCGACATAAATCCAAAGCAAGCACATATTTGTGATTTACCTGATGATTTTATCCAAAGCCACTTGCAATACAGGCACAAAGCATTGCTCAATAAAACCCAGAAGTAATCAGCTTGTggaatttaaatcaaaacaacattctagtatcaaataataatttaaaaacttgCTACACCACCCCTAAACCGGAGTAAATGTTTCACAATTTTCGAATAAGAATAATAACATATCCCATGTCTTGCAACTGGTAGCCCAaaagaatttttgttttagaaaaactATCCTGCCACAAGGGGGCAGAGGAAGACCATGAGATACACACAAAGGCATTGACACTCTTTATaccaaacaatatattttatttgtcgtCCAACACCACAGCCCA

Function

NR:

description
gap junction alpha-5 protein-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0007154 cell communication biological_process
GO:0005922 connexin complex cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0055077 gap junction hemi-channel activity molecular_function

KEGG:

id description
K07614 GJA5, CX40; gap junction alpha-5 protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU7913 False 2510 lncRNA 0.55 2 23018238 23020831
XM_043235811.1 True 4005 mRNA 0.43 2 23020786 23030310

Neighbor

gene id symbol gene type direction distance location
setd4 setd4,LOC107676883,LOC107560975,LOC107603051,LOC107746057,LOC107692116,LOC107746281,LOC107603006 coding downstream 104630 22909995 ~ 22913608 (-)
si:dkey-22n8.3 NA coding downstream 153547 22860868 ~ 22864691 (-)
pknox1.2 pknox1.2,LOC107560978,LOC107676856,LOC107603046,LOC107692119,LOC107718250,LOC107746279,LOC103022264 coding downstream 157526 22851708 ~ 22860712 (-)
pdxkb pdxk,pdxkb,LOC108428208,LOC103021965,LOC107676865,LOC108258310,LOC107718319,LOC105019670,LOC106574311 coding downstream 180830 22819346 ~ 22837408 (-)
agpat3 agpat3,LOC107746273,LOC107676863,LOC107692122 coding downstream 200226 22800579 ~ 22818012 (-)
neurl1aa neurl1,neurl1aa,LOC107676877,LOC107746052,LOC107746293,LOC107692176 coding upstream 122192 23152502 ~ 23203136 (-)
LOC122348966 LOC107675992,LOC107569046,LOC107729366 coding upstream 1002582 24032892 ~ 24038656 (-)
LOC122330280 zgc:154142,LOC107676135,LOC107594422 coding upstream 1061098 24091408 ~ 24101289 (-)
LOC122351487 LOC107675992,LOC107729366,LOC107569046 coding upstream 1134235 24164545 ~ 24168636 (-)
gsk3bb si:dkeyp-80c12.7,gsk3b,LOC107729358,LOC107569048,LOC107675878,LOC107684292 coding upstream 1191813 24222123 ~ 24242004 (-)
LOC122342025 NA non-coding downstream 39604 22973679 ~ 22978634 (-)
G5466 NA non-coding downstream 166890 22851012 ~ 22851348 (-)
G5465 LOC107676845,LOC107746297,LOC107560973,LOC107692180,LOC107718848,LOC107603005 non-coding downstream 176214 22841802 ~ 22842024 (-)
G5464 NA non-coding downstream 178646 22838956 ~ 22839592 (-)
LOC122341430 NA non-coding downstream 253123 22759628 ~ 22765115 (-)
G5577 NA non-coding upstream 589390 23619700 ~ 23622881 (-)
LOC122346633 NA non-coding upstream 678103 23708413 ~ 23713457 (-)
G5583 NA non-coding upstream 702864 23733174 ~ 23735603 (-)
G5568 NA non-coding upstream 705666 23735976 ~ 23736893 (-)
LOC122351911 NA non-coding upstream 1027703 24058013 ~ 24061212 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other downstream 101833 22913900 ~ 22916405 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other downstream 114824 22864831 ~ 22903414 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other downstream 415590 22539684 ~ 22602648 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other downstream 689309 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other downstream 730717 22272818 ~ 22287521 (-)
LOC122351696 LOC107729347,LOC107583214,LOC107566139,LOC107746059,LOC108434669,LOC106951888,LOC108258286,LOC106586852,LOC105012299 other upstream 740714 23771024 ~ 23916448 (-)
G5624 LOC107675992,LOC107569046,LOC107729366 other upstream 1002553 24032863 ~ 24172062 (-)
LOC122350023 LOC107675992,LOC107729366,LOC107569046 other upstream 1006753 24037063 ~ 24041958 (-)
LOC122351900 tcf7l2,lef1,LOC107750316,LOC107757012,LOC107684275,LOC107676173,LOC107594427 other upstream 1031130 24061440 ~ 24082876 (-)
atp5md taf5,LOC107676012,LOC107583167,LOC107574147,LOC107684290 other upstream 1163411 24193721 ~ 24251239 (-)

Expression


Co-expression Network