G5468 (cbr1,LOC107746284,LOC107560976,LOC107692178)


Basic Information

Item Value
gene id G5468
gene name cbr1,LOC107746284,LOC107560976,LOC107692178
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22913900 ~ 22916405 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU7878
TGAGAAATATCatggaattttatttttgtagttcaGTTTATTCATTAGAGACTTATGACATTTTTATCTGTGTTATTTATAGATACAACGCTCATCAGTTTAAATCCAACAAGATGATTGTTACAATCCACTGAGTAAAAGTATTTATGAATTGGacagtttattatttgtatgtatgtagcATCTACAAATATTTAACACCTACACAAGCTGGAGTTCTAAACTGTACGTCATGATCTTAAAGATATAGTTCACcaaattatgaatatttgcaaaatgtagatgaatttgtttttcatcagaacagatttgaaggAAGTTGCTCGCCAGTGGTTCCtttgcagtggatgggtgccgtcagagtccaaacagctgataaaaacatcacaataaccctCAAGTAATACGTCCGTCGATTAACATCTCGAAAAGCTAGGTTTGTAACTGCGACTCACATcacgacggcacccattcactgcagaggccGAGCAAGTGCAGCGCTGCTACATTtctgttcccatgaagaaacaagctccTCTAAAACCTGGACGACCTCGGGTTAAATCAATTTTCTACAAGtccatttttttgtgaactactcctttaagacCACATCGTTTTTGGTTGTTATTTAGTTTGTATATTCACCAAAACATATATACCATTTTAAAGCTTTCTgtgaaataattatgaaaataaagtacAAGATACCCAACTTTTAGCAACCCACTGTAAAGTTTTCTGTCAAGGGCTCAGTCTGAATTCAACCCAAAACTAAACCTCGTCTAAATCTTGTTGGGTGTATCACTCTCACCACGGCTGGACTTTCTTCTCTGAAACGAACTGCCCGTGGGGCTCTTTAGCCCCAGCAGGCAGCAACGCCAAGTACACTGGCGTGACGGCGCCCTCGTCTGGTGATTTGGTTGCATTTGGTCCAGCCATGTCAGTCCTGACCCATCCTGGACAGCAGGCATTGCATAGTATCTCATCTCCAGGCCTCTCTTTCGTCAGGTTCCGGGCCTGGATTCTGGTTAGGGTGGTAAGGCCAGTTTTAGAGACCCCATATGCAGTATTAGGCCAACCTCGCTCTGCATGAACCCCTTCCTGAGCGTCACGGACGAATCGCTCCATCAGTCCAACCAGCTCTTCTTCTGTAATGTCATCGCTTCGGAAGCGGGCCTGGAGCTCTGGACTGCAGCGGCTTAAAGCCACCGAGCTCATTATACTAGAGACATTCACCATCCGACCTAGAGATAAACGTTAGTGTTCGTGGGAAGACAAAAATCACCAGACAAGTTACAACTGACACGACTTACCTCCTGGTTTGATAATGGGGAGGAAGACGTTGCACATATCTCTAGTAGCAAAGAAAttagtcttcagcgtcacatctGCTTGGACGCCAAAGGGGGTCGTGTCCGCCGCTGCTCTTGAAGGCGATGCCAGCGTTGTTGACGAGCACGTCGAGGCCGCCGTACTTCTCTGTGAAGAAGTCCCGCGCGGAGCGGACGCTGTCGGGGTCGTTGATGTCCAGCCGGTGAAAGATCGGTGCCAGCCCCTCCTTCCTCAGACTGTCCACAGCAGCAGTTCCTCGACCGACATCCCGAGCCGTCAGATACACGTCTCCGGAGAAATCCTTGCACATTGCCCGCACGATTGCGAACCCGATGCCTTTATTCCCGCCAGTGACCAGAGCCACTTTACTGCCGCTCATTGCTGCGATGTGTTTGCGGTGGACAcgaa

Function

symbol description
cbr1 Orthologous to several human genes including CBR1 (carbonyl reductase 1).

NR:

description
PREDICTED: carbonyl reductase [NADPH] 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7878 True 1743 TUCP 0.46 2 22913900 22916405

Neighbor

gene id symbol gene type direction distance location
setd4 setd4,LOC107676883,LOC107560975,LOC107603051,LOC107746057,LOC107692116,LOC107746281,LOC107603006 coding downstream 292 22909995 ~ 22913608 (-)
si:dkey-22n8.3 NA coding downstream 49209 22860868 ~ 22864691 (-)
pknox1.2 pknox1.2,LOC107560978,LOC107676856,LOC107603046,LOC107692119,LOC107718250,LOC107746279,LOC103022264 coding downstream 53188 22851708 ~ 22860712 (-)
pdxkb pdxk,pdxkb,LOC108428208,LOC103021965,LOC107676865,LOC108258310,LOC107718319,LOC105019670,LOC106574311 coding downstream 76492 22819346 ~ 22837408 (-)
agpat3 agpat3,LOC107746273,LOC107676863,LOC107692122 coding downstream 95888 22800579 ~ 22818012 (-)
neurl1aa neurl1,neurl1aa,LOC107676877,LOC107746052,LOC107746293,LOC107692176 coding upstream 236097 23152502 ~ 23203136 (-)
LOC122348966 LOC107675992,LOC107569046,LOC107729366 coding upstream 1116487 24032892 ~ 24038656 (-)
LOC122330280 zgc:154142,LOC107676135,LOC107594422 coding upstream 1175003 24091408 ~ 24101289 (-)
LOC122351487 LOC107675992,LOC107729366,LOC107569046 coding upstream 1248140 24164545 ~ 24168636 (-)
gsk3bb si:dkeyp-80c12.7,gsk3b,LOC107729358,LOC107569048,LOC107675878,LOC107684292 coding upstream 1305718 24222123 ~ 24242004 (-)
G5466 NA non-coding downstream 62552 22851012 ~ 22851348 (-)
G5465 LOC107676845,LOC107746297,LOC107560973,LOC107692180,LOC107718848,LOC107603005 non-coding downstream 71876 22841802 ~ 22842024 (-)
G5464 NA non-coding downstream 74308 22838956 ~ 22839592 (-)
LOC122341430 NA non-coding downstream 148785 22759628 ~ 22765115 (-)
G5445 mcf2l,LOC107746267 non-coding downstream 231804 22681649 ~ 22682096 (-)
LOC122342025 NA non-coding upstream 57274 22973679 ~ 22978634 (-)
G5577 NA non-coding upstream 703295 23619700 ~ 23622881 (-)
LOC122346633 NA non-coding upstream 792008 23708413 ~ 23713457 (-)
G5583 NA non-coding upstream 816769 23733174 ~ 23735603 (-)
G5568 NA non-coding upstream 819571 23735976 ~ 23736893 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other downstream 10486 22864831 ~ 22903414 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other downstream 311252 22539684 ~ 22602648 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other downstream 584971 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other downstream 626379 22272818 ~ 22287521 (-)
LOC122348907 NA other downstream 1114156 21761881 ~ 21799744 (-)
gja5b cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072 other upstream 101833 23018238 ~ 23030310 (-)
LOC122351696 LOC107729347,LOC107583214,LOC107566139,LOC107746059,LOC108434669,LOC106951888,LOC108258286,LOC106586852,LOC105012299 other upstream 854619 23771024 ~ 23916448 (-)
G5624 LOC107675992,LOC107569046,LOC107729366 other upstream 1116458 24032863 ~ 24172062 (-)
LOC122350023 LOC107675992,LOC107729366,LOC107569046 other upstream 1120658 24037063 ~ 24041958 (-)
LOC122351900 tcf7l2,lef1,LOC107750316,LOC107757012,LOC107684275,LOC107676173,LOC107594427 other upstream 1145035 24061440 ~ 24082876 (-)

Expression


Co-expression Network