RNA id: TU8175



Basic Information


Item Value
RNA id TU8175
length 259
lncRNA type sense_over
GC content 0.46
exon number 2
gene id LOC122351900
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24061440 ~ 24082876 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aaagcaaTGATATCGCACGTTAGATATTAAGTTGTTAATATCTCTCTCCTACATTTTTGAACAGGCAGCTAGACAGTCCCAAATAACACCAGACTCTTATCATGAGAAGCACAGGGACCATCCGGACGATGGCAAGCATCAAGACATGTACAGCAAAGGCCACCCGTACCCCAGTTACCCAGGATACATCATGATGACCAATATGAACAATGAACCCTACATGAACAACGGCTCTCTCTCGCCTCCCATTCCCAGAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8163 lncRNA downstream 17837 24058013 ~ 24061212 (-) False LOC122351911
TU8164 lncRNA downstream 17837 24058013 ~ 24061212 (-) False LOC122351911
TU8165 lncRNA downstream 17837 24058013 ~ 24061212 (-) False LOC122351911
TU8166 lncRNA downstream 17837 24058013 ~ 24061212 (-) True LOC122351911
TU8167 lncRNA downstream 17837 24058013 ~ 24061212 (-) False LOC122351911
XR_006251604.1 lncRNA upstream 95781 24175891 ~ 24177649 (-) True LOC122350488
TU8185 lncRNA upstream 113611 24193721 ~ 24251212 (-) False atp5md
TU8187 lncRNA upstream 113611 24193721 ~ 24251212 (-) False atp5md
TU8184 lncRNA upstream 138788 24218898 ~ 24220786 (-) False si:dkeyp-80c12.8
TU8186 lncRNA upstream 168562 24248672 ~ 24251212 (-) True atp5md
XM_043249306.1 mRNA downstream 2908 24061440 ~ 24076141 (-) False LOC122351900
XM_043246219.1 mRNA downstream 37091 24040543 ~ 24041958 (-) False LOC122350023
XM_043244889.1 mRNA downstream 40393 24032892 ~ 24038656 (-) True LOC122348966
XM_043248966.1 mRNA downstream 162602 23772623 ~ 23916447 (-) False LOC122351696
XM_043227202.1 mRNA upstream 11298 24091408 ~ 24101289 (-) True LOC122330280
XM_043248575.1 mRNA upstream 84435 24164545 ~ 24168636 (-) False LOC122351487
XM_043248568.1 mRNA upstream 87104 24167214 ~ 24168636 (-) True LOC122351487
XM_043232803.1 mRNA upstream 138484 24218594 ~ 24221446 (-) True si:dkeyp-80c12.8
XM_043239800.1 mRNA upstream 142013 24222123 ~ 24242004 (-) True gsk3bb
TU8139 other downstream 33680 24036830 ~ 24045369 (-) False G5624
TU8160 other downstream 33680 24037345 ~ 24045369 (-) False G5624
TU8133 other downstream 33680 24040605 ~ 24045369 (-) False G5624
TU8141 other downstream 37052 24032863 ~ 24041997 (-) False G5624
TU8148 other downstream 37052 24037345 ~ 24041997 (-) False G5624
TU8153 other upstream 87002 24167112 ~ 24172062 (-) False G5624
TU8136 other upstream 87275 24167385 ~ 24172062 (-) False G5624
TU8137 other upstream 87275 24167385 ~ 24172062 (-) False G5624
TU8161 other upstream 87275 24167385 ~ 24168688 (-) False G5624
TU8132 other upstream 90220 24170330 ~ 24172062 (-) False G5624

Expression Profile