RNA id: TU8148



Basic Information


Item Value
RNA id TU8148
length 748
RNA type TUCP
GC content 0.36
exon number 4
gene id G5624
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24032863 ~ 24172062 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGAAATTTTGTGAGTCTGAGAATCCCTATAAAAGACAGAGGAGAGGCTTCACTCCTCACACTTTCACTACAGCTCCACTAGGACTTACTGCTTTCTCTGAAAGCTCAGCAAACCATTGAAGCTTCTTACGTTTTATTACACTCGCAAATTAGTTATGGCCTTTTTACCCAGAGCCGTTCTTCTGCTGATGCTTGGAGCAGTTTGTATTCAACTGAATGCAGTCGTAGATGCTGATGGACCTGACAGGTGCTggtgtttaaaaagtttaaataaacgTGTCCCAAGAGAAGAGATTGAAGAGTTTTCCATTTTCCCCCGAAGATCAAAGTGTAACAAGGTTGAAATCATACTGACACTAAAACCTGTGAATAACTCAACCGAAGTGGTGAAGCGCTGCCTGAGTCCAGAGACAAAACAAGGAATTAATCTGCAGACTTGCTGGAACAAGAAGAACGTCAACAACACCTCCACATTTAAGACATCCAGCTGCTTCGAAAGCCATCACTGAAAGAGCAGAAGAGCAGGGGAGGACAGAAGGGGATCTGGAAACTCTAGCAAGCCTGTGAGTGGAATGTCATCCTGTCACATGACCCGGcactgaccaatcagcatccTGGGATTTAAGTGTTGGCCTCATGCAGCTGATGGGAAATCACAGAAGACCCGAAAACACCCAGAGCACTGCCAGTAACCGCCGCACGCAGACGTTGTCGGCAAAAGCATTTGGATTAGAGTTCACTTGCTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8057 lncRNA downstream 171993 23771024 ~ 23865352 (-) False LOC122351696
TU8017 lncRNA downstream 300452 23735976 ~ 23736893 (-) True G5568
TU8036 lncRNA downstream 301742 23733174 ~ 23735603 (-) True G5583
XR_006251150.1 lncRNA downstream 323888 23708413 ~ 23713457 (-) True LOC122346633
TU8030 lncRNA downstream 414464 23619700 ~ 23622881 (-) True G5577
TU8135 lncRNA upstream 2095 24044092 ~ 24045369 (-) False G5624
TU8144 lncRNA upstream 2095 24044092 ~ 24045369 (-) False G5624
TU8151 lncRNA upstream 2095 24044092 ~ 24165646 (-) False G5624
XR_006251813.1 lncRNA upstream 16016 24058013 ~ 24061163 (-) False LOC122351911
TU8163 lncRNA upstream 16016 24058013 ~ 24061212 (-) False LOC122351911
XM_043248966.1 mRNA downstream 120898 23772623 ~ 23916447 (-) False LOC122351696
XM_043248986.1 mRNA downstream 120900 23772623 ~ 23916445 (-) False LOC122351696
XM_043248956.1 mRNA downstream 120900 23772623 ~ 23916445 (-) True LOC122351696
XM_043246654.1 mRNA downstream 834209 23152502 ~ 23203136 (-) True neurl1aa
XM_043246671.1 mRNA downstream 834480 23152502 ~ 23202865 (-) False neurl1aa
XM_043249314.1 mRNA upstream 19443 24061440 ~ 24082517 (-) True LOC122351900
XM_043249306.1 mRNA upstream 19443 24061440 ~ 24076141 (-) False LOC122351900
XM_043227202.1 mRNA upstream 49411 24091408 ~ 24101289 (-) True LOC122330280
XM_043248575.1 mRNA upstream 122548 24164545 ~ 24168636 (-) False LOC122351487
XM_043248568.1 mRNA upstream 125217 24167214 ~ 24168636 (-) True LOC122351487
TU8134 other downstream 2846 24032863 ~ 24034499 (-) False G5624
XR_006251794.1 other downstream 120897 23772623 ~ 23916448 (-) False LOC122351696
XR_006251793.1 other downstream 120899 23772623 ~ 23916446 (-) False LOC122351696
TU7878 other downstream 1120940 22913900 ~ 22916405 (-) True G5468
TU7773 other downstream 1486395 22539684 ~ 22550950 (-) False atp11a
TU8172 other upstream 37052 24079049 ~ 24082876 (-) False LOC122351900
TU8153 other upstream 125115 24167112 ~ 24172062 (-) False G5624
TU8136 other upstream 125388 24167385 ~ 24172062 (-) False G5624
TU8137 other upstream 125388 24167385 ~ 24172062 (-) False G5624
TU8161 other upstream 125388 24167385 ~ 24168688 (-) False G5624

Expression Profile