RNA id: XM_043240125.1


Basic Information

Item Value
RNA id XM_043240125.1
length 6127
RNA type mRNA
GC content 0.38
exon number 16
gene id grk4
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7624106 ~ 7648594 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGAATGCTAAcaagggggagagagagagagtacatgTCCACTGCGAGCGGAAAGGTGGGGGGTTCAACAGCGAGATATGGAGAAATACAATTAACCTGCAATGTGCCAACGCCAAATTCACGCCGATCACAACCATCCTCACCACcgatcatcatcctcatcctcaccgTCACCAACAGCGCGAGCGTCCTCGTCTTTTTTTCTCCTAAGTGAAATGTATCGGGACTGCATGGGATCTTTTTTCTGACAATGGAGATTGAGAATATCGTGGCCAACACCGTGCTGCTGAAGGCGAGGGAAGgaggaggagggaaACGGAACGGGCGGAGCAAGAAATGGAAGGAGATGCTCAAACTGCCTCATATCACCTTCTGTGAGGAACTCAGACGCACTATCGAGAGGGATTACACTAGCCTTTGTGAGAAGCAACCGATTGGTCGTCAGTTGTTTCGGCAGTTCTGTGACACGCAGCCCAAATTACGGCGGTGCATAGAGTTCCTGGATGCTGTGGCAATGTATCAGGTGGCTCCGGATGAGAAGAGGAGAGACGTcggtttaaatattttagacacatattttaataatgggTCGGCAGCTCATCTACCAGAGATCGCTCAGGATGTGGTTGGGGAATGCAGGCAGAAACTGGAACAGAGTCCCTGTAAAGAGCTCTTCCAGGAGTGTACCAGgaTAGTTCGTGAATATTTAAGTGGAGAGCCATTCTCAGCATATCAAGAGACAATGTACTTTTCCCGTTTTCTTCAGTGGAAGTGGTTGGAGAGGCAACCAGTTACCAAAAACACTTTCAGACACTACAGGGTATTAGGCAAGGGCGGATTTGGTGAGGTTTGCGCCTGCCAGGTTCGTGCCACTGGTAAGATGTACGCCTGTAAAAAGCTGGAGAAGAAACgggtgaagaaaagaaaaggtgaAGCAAtggcattaaatgaaaaacgCATTTTAGAAAAAGTTAACAGTAGTTTTGTAGTCAGTTTGGCATATGCATATGAGACTAAAGACGCTCTATGTTTGGTGTTGACTATAATGAACGGTGGTGACCTGAAGTTTCATATCTATAACATGGGAAACTCTGGCTTTGATGAACAGCGTGCCATCTTTTATGCAGCAGAGATCTGCTGTGGCTTAGAGGACCTTCATCGAGAGAGGATCGTCTACAGAGACTTGAAGCCTGAGAATATTCTCCTTGATGACCGCGGGCACATCCGTATTTCTGATTTGGGACTGGCCGTCCAAATACCAGAGGGTGAGACGATACGAGGGCGAGTTGGCACGGTGGGATACATGGCGCCGGAGGTCATTCAGAACGAGAGTTACACCTTCAGTCCTGACTGGTGGGGTTTGGGCTGCCTGATATACGAAATGATTCAGGGTCAGTCTCCCTTCCGACGCCGCAAAGAGCGCGTGAAGCGAGAGGAGGTGGACCGCCGTGTATGCGAGGACCAGGAGGAGTACACTGAGAAGTTCTCTGAAGATGCTAAAGATATCTGCCGACAGTTGTTATGTAAAGATCCAAAGGAGCGTTTGGGTTGTCGAGGTTGTGGAGCGGCTGAAGTCAAACTGCATCCTATTTTCCGAAACATCAACTTCAAGCGATTGGAGGCCAACATGCTAGACCCTCCATTCTGTCCTGATCCACGCGCTGTGTATTGCAAGGATGTTCTGGACATAGAGCAGTTTTCTACAGTAAAAGGTGTAAACCTGGACCCTACTGATGATGACTTCTACCACAAGTTTGTAACAGGAAGTGTCTCCATCCCATGGCAAAATGAGatGATTGAGATGGAGTGCTTTAAAGAGATTAATGTGTTCGAGATGGATGGAGCACTGTGTTCTGATCTGGATGTGAACAAGCCAAATCCAGCTCCCAAGCGAGGATTCTTCTACCGTTTATTCCGCCGAGAGGTTTGTTTTAGGAGTGCCAACagtgaggaggaggagccatcTTGACTTAAAACCACTCCCACTTCCCATCAGCTGCCAATCAGAATGCTAAACGTATGAATGTTCAACTGTATTTATGAACTGTATTAAACTGTATCATAATTAAAGAAAAGGGTATGAGTTTAAagaattttgtacatttgtacttGAATTATGTGTAGATGTATATTTTCACTAAAGGTTGTATTGTACAAAAAGCCATAGAAATACCACTtgaatgcatatataatgtttttattgttattatttttcatctgtactgaatatgaaatgtgtatttctttttaagcaCAATATAAAcactcacttttattttttaacgctAACCTCCTGTTAGCACTGCCTTTGTTTGTATGTTAGATTGTTTGGCTGAACAGATTTGGTGCACTTGTTTTGTACAGTGGGGGGAGATAAATGAACATAAAGAAAGGAGTTTAAATGACCTATTCATCATTATTAATTCTAGTGGTCAGCCAAAACGGGTTGATGGCTGATGttcaaatgcttaaaaactgtATAGCCTACATgtacagtggggtccaaaagtcTGACAACACTAAGCAAAATGCTTCCGCTTCGTGAATTTCTAATTCAGtgcaatttttaaaagcaaatgataTGATCAGCATAACAATCCGAGTTAATGCTGAATTGAAAACGAACAATATTAGAATCTCTTAGTATTTGTTCTGTCTGTCAAACCAATTTTGCTCATTTAGCTAGTAAACTACACACAAAATGGCATAGaaactatttttattcagaaattgcACTTCAGTTTTTTTGAGTATtcgaaaaataatttttacgtTGTAGAGATCTGACATGCTTCATgttcatttttctgtttttactctTCTAAAGCATTCTgtttatttctagttttaaattGCCATGTAGAATCCTACGTTTTCAGTGTAGCCTCAGACTTATGAACTCCACTgtataattcacatttttaaaacagaaaatgtcttttgaaaAAAGCTGTTGGTGTATTGTTGTACTGATACAAGGAAGCGTTAACACTTACAGTGCTGATCATGGGAGTGTCAGTAGCGAGTGCCAATAGCCTCAAAATGACCAAATGTTAAACAAATGAATTTAGCCTCATTGATATATCAGTCTATTACTAGTCATGACCATTCACCCATAGCTTCCATGCAGTTCATGCAGCTGTTACGAAGTGCATGAAACAAGTAATTCCTACATCTTTGATATCTGTTCATTAGATGACTAATAACTATTTTGGTCATGTGcataaacaagacaaaaacacatttgttccAATTTTGAAACTTCTGTATATGTTAAATACTGTCATATCGATGACAGGGAAACAATCGGACATATTGCGCAATTGCCCAACAGTTTACAGTGGCTAATACTAACTCTGATATCTAGAGAGCAGGATGGCTGATGTAATGCTGATATATACGTAAATAgttcatttaaaggaataaatcacccaaaaaagtttaatttggtCACCCTCATCCAGTTCACCCAAGATGTAGCTCTTAATCAGAACAGGTTTGATAAAATGTAGCATTCTATTACTTGCTTACAAatggatcctttgcagtgaatgggtgccgtcagactgaCAGCTAGCAGTCctaacagctgatgaaaacatcacaataatcaagtgaaaaagatgtaaaaaagatttcaacaaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatattatattgtaagagagaaatatgcacagattaaGCACcatttaagagtaaaaaaataaatgacaggaCAACCGAGAATGAGCAATTTTACTAgaggaattattattttattaagtgttaaagtattaataataaagaaaaaaatgtttaatgtttaaaaactcattttgacagcacccattcactgatagaatgatacatttctccaaatctgttccaataaataaacaaactcatctatgTGCTGGATGGCCAGAGGGGGagtatattttcatgttttggaTGAACCTTTAATTATATCCTAATACTCTATATTTACTCAAGATCCACGTAAAacttaaatgacaaaaatgtgatattttgtaATGAAGCTTTTGTTAGATTTTGGACCTGATGCaggagaataataataataaaacttttaagtGGCTATAGTTATGGATGATAATGATAATCTCAAAATGAGTATTGTATAATGAATCAATTTTGTTGACTGATATCCACCACATTCAGTTCAGCTTCCTGCCTCTGCTCTCATGCTTACCTTTAGTGCCATCAGGAATCTTTACAGTGGTTTCAAGCAGGCCAATGTAAACCACCTAAATAAGCTTCACTTCAAATTTGCTCACGACGGCTCTTAAACGAGCCGTTGATTTTTGCCTTAGGTGTCTATGTTCAGTTAATATTCCAAACGGAGTACTGAATGATCTGTTAATGATAatcatgtaatgtaattaaccGTGCAATCTCTTTATCCTACACATGCACATTTTACCTTCCATTTTTGATTAGTTCGTTTTGCTTTTGTGTGCGTTTGTAAGCTGTTATTTCAGTCACGACGGGGTAATGCTTCCATTCGGTGATGGGGATTAGTCTCAGATGTATCGTTCCTAAATGTGTAGAAAAGAAATTCCCATTGAAATGTCTTTTATGTAgggcattttattttgatgcagttctttaaagcagaaatgtcatttttgatctaatatttctttctcttgGCCCGTAGTAATGCACAGAGACAAAATACACAGTTCATATAATAATTCCGTCTCTGGCACGATCAAAACGCTCCTGTCTGTTGGAGAATCCCAACCAATTGCATGAGTCGGGGGGCGGGGTTATGACAGTAAAGCCCAAATAGGAAGCACTGTTTTACCTTTGACGGCTCCATCAACCATACTTGTTTCTATTTTTAGGAGGATCTTTATGGTCCCTTTTGCAAAGCTGTGAAGTTAAACTCCTCTTTTGTTATTCCCATATGTGTGCATGTTCTACTGTATCCATGGTTTTACAAGAGGAAGAGCACTCACTTTAGTTGACAATAAAATTATGAGTTGACATATGgccattaaaatgtacttttcattCTCTATGAAAACTCGCcaggattttttgtttttgaagcttGTATATTTGAAGATTACACTGCCCGTGTTTTCTCCCTTGCGGTCACATGTTTGATTCAGTTATTCTATATAtagtgataataaaataattcaatttgaaaaatgattCGATTTGGAATGAATTAAAAGTAGTTTTGGTGTGTCATGGTTTAACCAAACATCCtgtgtattttttcaatttagagACTTTAGGACACAAGAATTTAGGTTGACACGACTGGTCAAGCTTATAGAATTGACACattatttaatctaattcaCATAAGGGGATGAAGTTTAATTTAtccttttttaattaacaatagcCCATCGCAATTATGTGTACAAAGTAccattatttcttaaaataactttaaaaatccCCCCACCTCTGATAAAGCATTTGGCTTAAACAGTTTAGTCGATGAAGCACTGACTAACTGcaagcttaaaggaatagttaaaatgaaaatttgctatAAATGTACTCATCCTCGGGCCATCCatgtagatgtgtttgtttattggaacagatttggagaaatttcaTCAGTTGCTTATCAATGAATACTCcgcaatgggtgccgtcagaatgatgATTGAATCACAACAataatccacacgactccagTCCCTCAGTTAACGTCTtgtgacattttataaaaatcaaatcTGAGATCTTTATAATAAATCTTCCTCTAGTGAAAAAGTGCAtcccctgttgtcctctcacatcaaaatgtacacaatgtacttttttcaggattctgacaaacccattcactgcagagtatCCATCGGCGCACGAGTCatgtaatgctgcatttctccaaatgtatttaaatgaatggcCAGAGTGTGAGTacattttaagaacatttctgagtgaactacTTCTTTAAGTTGCATGCCATAAAATGCAAACCTGTCAGATACTGGATGCCGTGTTGTTAAGAGTTTATGATGTACAGATCTGTCGCTCAAAACAGTCTGGTGTTGTATCATCTAgaactattaaaatatacactGCCATTTGTATGAAA

Function

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0085033 induction by symbiont of host I-kappaB kinase/NF-kappaB cascade biological_process
GO:0005524 ATP binding molecular_function
GO:0004703 G protein-coupled receptor kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2428 lncRNA downstream 307788 7315910 ~ 7316318 (-) True G1663
TU2425 lncRNA downstream 311208 7312252 ~ 7312898 (-) True G1660
XR_006250485.1 lncRNA downstream 325961 7297494 ~ 7298145 (-) True LOC122341717
TU2397 lncRNA downstream 454084 7167577 ~ 7170022 (-) True G1642
TU2398 lncRNA downstream 459385 7162323 ~ 7164721 (-) False G1642
TU2585 lncRNA upstream 7484 7656078 ~ 7660532 (-) True G1781
TU2621 lncRNA upstream 94901 7743495 ~ 7797446 (-) True G1809
TU2672 lncRNA upstream 304619 7953213 ~ 7984303 (-) False G1845
TU2673 lncRNA upstream 332177 7980771 ~ 7984303 (-) True G1845
TU2691 lncRNA upstream 426581 8075175 ~ 8077330 (-) False LOC122341751
XM_043250313.1 mRNA downstream 7806 7607639 ~ 7616300 (-) True iqce
XM_043250304.1 mRNA downstream 7812 7607639 ~ 7616294 (-) False iqce
XM_043244596.1 mRNA downstream 17039 7578940 ~ 7607067 (-) True ttyh3b
XM_043234143.1 mRNA downstream 46637 7573728 ~ 7577469 (-) True zmp:0000001069
XM_043246607.1 mRNA downstream 83746 7533249 ~ 7540360 (-) False brat1
XM_043237392.1 mRNA upstream 35505 7684099 ~ 7686855 (-) True pla2g12a
XM_043249867.1 mRNA upstream 58291 7706885 ~ 7717325 (-) True LOC122352459
XM_043241517.1 mRNA upstream 73508 7722102 ~ 7729740 (-) True b4galt1
XM_043240941.1 mRNA upstream 113787 7762381 ~ 7770526 (-) True cplx2l
XM_043240938.1 mRNA upstream 113787 7762381 ~ 7770524 (-) False cplx2l
XR_006250550.1 other downstream 328427 7218986 ~ 7295679 (-) False dmd
XR_006250549.1 other downstream 328473 7205584 ~ 7295633 (-) False dmd
TU2401 other downstream 454685 7162323 ~ 7169421 (-) False G1642
XR_006250919.1 other downstream 496699 7071589 ~ 7127407 (-) False trpc5a
TU2105 other downstream 1082723 6539528 ~ 6541383 (-) False LOC122342514
TU2800 other upstream 954706 8603300 ~ 8607795 (-) True G1926
TU2970 other upstream 1130624 8779218 ~ 8782587 (-) False LOC122351550
TU2978 other upstream 1146477 8795071 ~ 8798355 (-) False LOC122351550
TU3335 other upstream 2750593 10399187 ~ 10401686 (-) True G2302
TU3397 other upstream 3093328 10741922 ~ 10745896 (-) False LOC122347930

Expression Profile