RNA id: TU119872


Basic Information

Item Value
RNA id TU119872
length 656
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G81033
representative False

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11505660 ~ 11507769 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tatatatatatatatatatatatatatatatatatatatagcattgaCAATAAATAGagcattttcataaaattattatatttgtctttatctgtaattaaaatatgactTGCTCCATATTTCTAGCATTTCCTCAAGCCCTCCATCCGACtctattttgttattaatcaaCCTTTTTTGTTCTTCGTGGAGTTTCTGTCTGAGTGATTTTCACACGCACTGAAAGCACGTCTCACCAGCTGGATGATGTTGGTGACGCTCTGCCAGTTGGCGAGTTTGATGTGATCTCCTCCGTCCACCAGACCctgataaccctggagaaacaCAAGCGTCAGAAGGTCGGCGGCGGCGCGGAGCGAGCGAGCGGGGCGTGAGGGGTCGCGTCTCTCACCTCGTAAATCAGGTAGACCTTAGCGCCCACGTAAATGCCCATGCGTGTTACAGCGCGGACGGCGGCGTTCACCCTGCGCGTCTCCGCCGCTCGTCAGCACCGCGATGGCTTTCCCCGCGCCGCTCATCCGCAGCTTCTCGAAGTCCACATGCATGATGGAAGACCGCAGATATCAGCCCTGAACGCCCGAAAACACGCCGCTCCGCCGCGCACCGACTCCTCCGAAAGCTGCTCACTCTCTCCTCACGCAGCGCACGAACTCCGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119863 lncRNA downstream 15666 11486540 ~ 11489994 (-) True G81029
TU119857 lncRNA downstream 36076 11469355 ~ 11469584 (-) True G81025
TU119854 lncRNA downstream 40941 11458438 ~ 11464719 (-) True G81023
TU119842 lncRNA downstream 112015 11390592 ~ 11393645 (-) True LOC122354635
TU119875 lncRNA upstream 3705 11511474 ~ 11511863 (-) True G81034
TU119877 lncRNA upstream 11282 11519051 ~ 11519447 (-) True G81036
TU119878 lncRNA upstream 12362 11520131 ~ 11520802 (-) True G81037
TU119771 lncRNA upstream 15443 11523212 ~ 11576769 (-) True G80961
TU119881 lncRNA upstream 17289 11525058 ~ 11527052 (-) False G81038
XM_043252193.1 mRNA downstream 1215 11499911 ~ 11504445 (-) True cfap410
XM_043252194.1 mRNA downstream 1215 11500109 ~ 11504445 (-) False cfap410
XM_043251848.1 mRNA downstream 49040 11444822 ~ 11456620 (-) True LOC122353939
XM_043251849.1 mRNA downstream 62091 11434329 ~ 11443569 (-) True ogal
XM_043252895.1 mRNA downstream 88409 11405002 ~ 11417251 (-) True tk1
XM_043251824.1 mRNA upstream 41830 11549599 ~ 11596374 (-) True strn
XM_043252389.1 mRNA upstream 149209 11656978 ~ 11661044 (-) True irf2bp2b
XM_043252116.1 mRNA upstream 193393 11701162 ~ 11705953 (-) True rbm34
XM_043251779.1 mRNA upstream 209493 11717262 ~ 11752522 (-) True LOC122353888
XM_043251741.1 mRNA upstream 259062 11766831 ~ 11780808 (-) False ero1b
TU119760 other downstream 86330 11403644 ~ 11419330 (-) True G80956
TU119843 other downstream 110784 11393360 ~ 11394876 (-) False LOC122354635
TU119776 other downstream 220371 11263332 ~ 11285289 (-) True mafgb
XR_006252140.1 other downstream 244540 11251255 ~ 11261120 (-) True si:ch73-100l22.3
TU119670 other downstream 360641 11140914 ~ 11145019 (-) True srsf7b
XR_006252062.1 other upstream 259062 11766831 ~ 11780809 (-) False ero1b
XR_006252156.1 other upstream 393199 11900968 ~ 11901098 (-) True LOC122354705
TU120112 other upstream 565827 12073596 ~ 12074075 (-) True G81192
TU120285 other upstream 938091 12445860 ~ 12447287 (-) True G81318
TU120624 other upstream 1310353 12818122 ~ 13057881 (-) False G81512

Expression Profile