RNA id: TU119877



Basic Information


Item Value
RNA id TU119877
length 316
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G81036
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11519051 ~ 11519447 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTCCAGCTCGCGGATGTTGAACGACTCCTCAAAGATGTAGACGGCGTCTGCTCCCACGGCGATGCCGGTGGTGGTTGCTAGGTAACCGCAGTATCCGCCCATGGTCTCCACGATGAAGACGCGCCGCTTGGTTCCAGACGCAGACTGCTTGATTTTATCACAACTctccatggCAGCGTTCACAGCCGTGTCTGCTCCCAAACTGAAGTCTGTGCCTGGCACGTTGTTGCTGATGGTGGCAGGAATCACACACATAGGGATACACAGCTCATCATAACGACCTCGAGCCTCAACCAGCTGAAGAACTCCTTCATAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119875 lncRNA downstream 7188 11511474 ~ 11511863 (-) True G81034
TU119872 lncRNA downstream 11282 11505660 ~ 11507769 (-) False G81033
TU119874 lncRNA downstream 11282 11506701 ~ 11507769 (-) True G81033
TU119863 lncRNA downstream 29057 11486540 ~ 11489994 (-) True G81029
TU119857 lncRNA downstream 49467 11469355 ~ 11469584 (-) True G81025
TU119878 lncRNA upstream 684 11520131 ~ 11520802 (-) True G81037
TU119771 lncRNA upstream 3765 11523212 ~ 11576769 (-) True G80961
TU119881 lncRNA upstream 5611 11525058 ~ 11527052 (-) False G81038
TU119882 lncRNA upstream 5611 11525058 ~ 11527052 (-) True G81038
TU119883 lncRNA upstream 5611 11525058 ~ 11527052 (-) False G81038
XM_043252193.1 mRNA downstream 14606 11499911 ~ 11504445 (-) True cfap410
XM_043252194.1 mRNA downstream 14606 11500109 ~ 11504445 (-) False cfap410
XM_043251848.1 mRNA downstream 62431 11444822 ~ 11456620 (-) True LOC122353939
XM_043251849.1 mRNA downstream 75482 11434329 ~ 11443569 (-) True ogal
XM_043252895.1 mRNA downstream 101800 11405002 ~ 11417251 (-) True tk1
XM_043251824.1 mRNA upstream 30152 11549599 ~ 11596374 (-) True strn
XM_043252389.1 mRNA upstream 137531 11656978 ~ 11661044 (-) True irf2bp2b
XM_043252116.1 mRNA upstream 181715 11701162 ~ 11705953 (-) True rbm34
XM_043251779.1 mRNA upstream 197815 11717262 ~ 11752522 (-) True LOC122353888
XM_043251741.1 mRNA upstream 247384 11766831 ~ 11780808 (-) False ero1b
TU119760 other downstream 99721 11403644 ~ 11419330 (-) True G80956
TU119843 other downstream 124175 11393360 ~ 11394876 (-) False LOC122354635
TU119776 other downstream 233762 11263332 ~ 11285289 (-) True mafgb
XR_006252140.1 other downstream 257931 11251255 ~ 11261120 (-) True si:ch73-100l22.3
TU119670 other downstream 374032 11140914 ~ 11145019 (-) True srsf7b
XR_006252062.1 other upstream 247384 11766831 ~ 11780809 (-) False ero1b
XR_006252156.1 other upstream 381521 11900968 ~ 11901098 (-) True LOC122354705
TU120112 other upstream 554149 12073596 ~ 12074075 (-) True G81192
TU120285 other upstream 926413 12445860 ~ 12447287 (-) True G81318
TU120624 other upstream 1298675 12818122 ~ 13057881 (-) False G81512

Expression Profile