RNA id: TU13257



Basic Information


Item Value
RNA id TU13257
length 396
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G8856
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2215433 ~ 2215828 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TACAGTAAGTGAACGTACATGAAATTAATAATGAAGCGAAATTAATAATACTCCATACTTCAGGATCAggagaaaaataacaacaaaaaataatcatttacaatttatttattatttaaaaaatagtcatTAACAACAGTTCTCTATTTTAATAGCAGtgtcacatttattattattaatttgaaaaaataattccGTTGGAAAAAGTGCTGTTgaaaagcatatattttttaagatataCTGATccataaaaagttcaaaaatcaTTCGCTTAatacttatttaatattattattatttttttttttacaactacTTCTTTTAGATTTGTTGACAGTAGCACCACGGACCCCGCAGAGGTTACGGGCCCCCGCCGAGGCCCCTGATTTAGAGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU13255 lncRNA downstream 2380 2212772 ~ 2213053 (-) True G8854
TU13248 lncRNA downstream 29337 2185649 ~ 2186096 (-) True G8847
TU13246 lncRNA downstream 30728 2182252 ~ 2184705 (-) True G8846
TU13245 lncRNA downstream 34757 2179839 ~ 2180676 (-) True G8845
TU13244 lncRNA downstream 35226 2179839 ~ 2180207 (-) False G8845
TU13260 lncRNA upstream 4120 2219948 ~ 2220838 (-) True G8859
TU13263 lncRNA upstream 13994 2229822 ~ 2230293 (-) True G8862
TU13279 lncRNA upstream 82968 2298796 ~ 2301016 (-) False insl5b
TU13293 lncRNA upstream 110236 2326064 ~ 2525847 (-) True G8885
TU13297 lncRNA upstream 132244 2348072 ~ 2400597 (-) True G8889
XM_043257903.1 mRNA downstream 11051 2189510 ~ 2204382 (-) True LOC122358118
XM_043253625.1 mRNA downstream 46112 2158449 ~ 2169321 (-) False LOC122355393
XM_043253616.1 mRNA downstream 46113 2158449 ~ 2169320 (-) True LOC122355393
XM_043253388.1 mRNA downstream 133933 2075896 ~ 2081500 (-) True LOC122355284
XM_043256269.1 mRNA downstream 144906 2056567 ~ 2070527 (-) True LOC122357078
XM_043219833.1 mRNA upstream 83042 2298870 ~ 2301360 (-) True insl5b
XM_043258567.1 mRNA upstream 245481 2461309 ~ 2465921 (-) True LOC122358726
XM_043258655.1 mRNA upstream 295779 2511607 ~ 2517254 (-) True LOC122358781
XM_043258584.1 mRNA upstream 301887 2517715 ~ 2519534 (-) True LOC122358747
XM_043258602.1 mRNA upstream 301887 2517715 ~ 2519099 (-) False LOC122358747
XR_006247870.1 other downstream 830267 1385097 ~ 1385166 (-) True LOC122328981
XR_006247864.1 other downstream 830558 1384697 ~ 1384875 (-) True LOC122328955
XR_006247866.1 other downstream 831158 1384090 ~ 1384275 (-) True LOC122328960
XR_006247871.1 other downstream 831649 1383708 ~ 1383784 (-) True LOC122328985
XR_006246996.1 other downstream 1012446 1179945 ~ 1202987 (-) False dipk2aa
TU13282 other upstream 223533 2439361 ~ 2441713 (-) False G8880
TU13285 other upstream 224296 2440124 ~ 2441713 (-) True G8880
TU13346 other upstream 226356 2442184 ~ 2443319 (-) True G8913
TU13363 other upstream 260885 2476713 ~ 2502739 (-) True G8921
TU13373 other upstream 300951 2516779 ~ 2517260 (-) False LOC122358781

Expression Profile