RNA id: TU148144


Basic Information

Item Value
RNA id TU148144
length 1524
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G100157
representative True

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 16313515 ~ 16315111 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGGCATGCgcatagctttatttttttgggatATACAAAGTGTATGGAACAGTGAAAGTGATATACAGGGACAGAGAATGATCCCTGTTAGGTCAGTTTAGGCAGGTTAACTCGGTTGAAAAAGTGAACGCAACACATTCAAAGGCCCCAAATGAGGCTCTGGTGGAATGCaataacagaacaaaaaaaaaacatcacaaatattCTTTACAGACATTTCTTGGGGGACGTTTGCATATTTTCCTTGcctttaaaaacctgttttcagGTACTCTGGATTCTCCGGGTATGCTATTTAACCACCACATCATACAAGTAATGTCATAACATGCAACAGTGCTTAAATCACTCCAATAACAGAATCAAACCAGGAGTTTACCAATGATTTGCAAATATGAACCTGATTACTGAATAGTGTACAATGGCTGAGCTTTCCTCAAGACACTGTTGATATCAGCTTTTCCATCAATACTTTGAAGTCCAACTTAATGACAGTATCAGGATGGCTTTAAACACCCAACAACATGCCAGCAGTTAAAAAGTGAACAGAACCAATCCAGCACTCAAGAACGTCGGGTGGgataaaatatgtttgttacCCCGATTATAAAACCCAGTACAAGTGAAACAGCTTATTGACAGAAACTCCCATGTAAATCATAAATGGATGTGTACAAGATGGAATGCATAGAAGGCCACAATTTGGTACAAAGAGCATAAAACGAAGCTCTTGcaaagtttacataatatagttACACTTTTAATACTAAACATCTTATCAAGCTCAAGCCTTAATGAAGTAATGGCAGTTCATGTGCAAAGGTATTCCTGTCTAAAGAGAACAAACAGATAACATGTCTACAGAGCGCAATACAAGTGCAATCTAAACGTTATACGACCCTGCAATGGAGGATGTCTTTGGCTGAACTGGAATGAACAACTGTAAACATATCAATGCAGTTCTGCGGAGAGTTTAGCCCTTGTGCTAAATCTATACCTGTCCCTGAAAAACCAGCTGCTGGTTTGTGATATTTGGTcgagttatttaaaaatctgctttAAGGTACTCTGACAAAACGAGTCGGCCTGCATTAGAAGTAGAAATTTAAGTGCTATGTTTGGAGATATGCATTATTTGGTAACATATTATTGGTCGCGTCTGTGCAGTTTACATCTCGTTCTTGGCATCTTCGGTGTGGCTGAGAAGCTATCTTGTCTTTTTCTGCTGTGCAGCCACCTGACCCTGGCTTCTTGTCTTGTTTAACACATCTGTGGCctgaaaaaaatCTGCTCTAAGATTACTCCAGCAGCCTGGTCTATGGCGGAGCCTACTTCTCTGTACTGGCCAGAGTACCGGATAAAGGCCCAGGTCAGCATTGCAATCATGGCCAGGCCAACTACACAGTCACATGCAAAGGAAATAGTTTCCAGGCCAATGAAGAACAAAATTCCTGACAGCACGTAGAGGAGGCAGACCAGGACAAACAGCACTGCAGGTGTCCGGAAAGCGCTAAAAACATTCTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148120 lncRNA upstream 90066 16223217 ~ 16223449 (+) False c14hxorf65
TU148078 lncRNA upstream 313000 16000098 ~ 16000515 (+) True G100123
TU147931 lncRNA upstream 338730 15970638 ~ 15974785 (+) True G100015
TU147960 lncRNA upstream 393073 15919747 ~ 15920442 (+) True G100033
TU147940 lncRNA upstream 397501 15888307 ~ 15916014 (+) False G100015
TU148165 lncRNA downstream 77598 16392709 ~ 16394409 (+) True G100172
TU148179 lncRNA downstream 126620 16441731 ~ 16484341 (+) False zdhhc2
TU148192 lncRNA downstream 167162 16482273 ~ 16482598 (+) True G100185
TU148333 lncRNA downstream 204829 16519940 ~ 16520174 (+) True G100298
TU148334 lncRNA downstream 206432 16521543 ~ 16521772 (+) True G100299
XM_043257856.1 mRNA upstream 7035 16288440 ~ 16306480 (+) False LOC122358083
XM_043257855.1 mRNA upstream 7035 16288443 ~ 16306480 (+) False LOC122358083
XM_043257857.1 mRNA upstream 7035 16300857 ~ 16306480 (+) False LOC122358083
XM_043257854.1 mRNA upstream 7035 16300858 ~ 16306480 (+) True LOC122358083
XM_043257323.1 mRNA upstream 34333 16270593 ~ 16279182 (+) True ubl3b
XM_043257061.1 mRNA downstream 20044 16335155 ~ 16339801 (+) False fosl1a
XM_043257060.1 mRNA downstream 20045 16335156 ~ 16339801 (+) False fosl1a
XM_043256570.1 mRNA downstream 31454 16346565 ~ 16351052 (+) False fibpa
XM_043256571.1 mRNA downstream 31484 16346595 ~ 16351052 (+) True fibpa
XM_043257975.1 mRNA downstream 38671 16353782 ~ 16366097 (+) True efemp2a
TU148129 other upstream 34336 16270565 ~ 16279179 (+) False ubl3b
XR_006252592.1 other upstream 503448 15810005 ~ 15810067 (+) True LOC122358307
XR_006252591.1 other upstream 503786 15809656 ~ 15809729 (+) True LOC122358306
TU147891 other upstream 574418 15724212 ~ 15739097 (+) False zic3
XR_006252491.1 other upstream 1684303 14581463 ~ 14629212 (+) False macrod1
TU148690 other downstream 1746662 18061773 ~ 18063399 (+) True G100560
TU148907 other downstream 2168989 18484100 ~ 18490715 (+) False mtnr1al
TU149047 other downstream 2607304 18922415 ~ 18924261 (+) True G100796
TU149048 other downstream 2607387 18922498 ~ 18924261 (+) False G100796
TU149239 other downstream 2975259 19290370 ~ 19295178 (+) False cxcl14

Expression Profile