RNA id: TU92955



Basic Information


Item Value
RNA id TU92955
length 224
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G62805
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10301662 ~ 10301885 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cAAAACTCAAAAGTCACATTCTTTACAGTATGTTCATTTATGCACTCAGTACTTGGTCTGAGCTCCTTTAGCACAAACCCCAGAATCAGTGAAGTGTGTCGTGGATGCGATCAGTCAGTATTGTTGGGTCATCTTTCTCTTGAAACTATCTCATAAATTCCATATGGGGTTCAGGCCAGGCGTGTTGGTCGGCCAATCAAGCACAGCAATATCATGGTCAGCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92949 lncRNA downstream 36901 10263818 ~ 10264761 (-) True G62800
TU92943 lncRNA downstream 48406 10250633 ~ 10253256 (-) True G62795
TU92944 lncRNA downstream 49427 10250633 ~ 10252235 (-) False G62795
TU92941 lncRNA downstream 53541 10245196 ~ 10248121 (-) True smim24
TU92937 lncRNA downstream 144469 10156975 ~ 10157193 (-) True G62789
TU92967 lncRNA upstream 23856 10325741 ~ 10327208 (-) True G62817
TU92973 lncRNA upstream 68448 10370333 ~ 10373331 (-) True G62821
TU92977 lncRNA upstream 79832 10381717 ~ 10443630 (-) False G62824
TU92982 lncRNA upstream 79832 10381717 ~ 10443630 (-) True G62824
TU93013 lncRNA upstream 81835 10383720 ~ 10484599 (-) True G62829
XM_043246944.1 mRNA downstream 1356 10298359 ~ 10300306 (-) True tmco1
XM_043247622.1 mRNA downstream 4590 10291698 ~ 10297072 (-) True LOC122350862
XM_043246950.1 mRNA downstream 10552 10284492 ~ 10291110 (-) False zgc:112962
XM_043246949.1 mRNA downstream 10552 10284492 ~ 10291110 (-) True zgc:112962
XM_043246948.1 mRNA downstream 17300 10280303 ~ 10284362 (-) False si:dkeyp-82a1.6
XM_043247452.1 mRNA upstream 14540 10316425 ~ 10320373 (-) True cpt2
XM_043247453.1 mRNA upstream 14540 10316425 ~ 10320371 (-) False cpt2
XM_043247531.1 mRNA upstream 27891 10329776 ~ 10338669 (-) False gls2a
XM_043247530.1 mRNA upstream 27891 10329776 ~ 10338669 (-) True gls2a
XM_043246165.1 mRNA upstream 185905 10487790 ~ 10491200 (-) True LOC122349990
TU92747 other downstream 332177 9961797 ~ 9969485 (-) False mllt1a
TU92748 other downstream 339961 9954750 ~ 9961701 (-) False mllt1a
XR_006251623.1 other downstream 1038836 9257952 ~ 9262826 (-) False mindy4
XR_006251592.1 other downstream 1644376 8652426 ~ 8657286 (-) False pola2
TU92043 other downstream 1651697 8647281 ~ 8649965 (-) True mrps36
TU92903 other upstream 87298 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 138879 10440764 ~ 10478685 (-) False G62826
unassigned_transcript_1293 other upstream 238334 10540219 ~ 10540291 (-) True trnar-ccg_26
TU93206 other upstream 685561 10987446 ~ 10990704 (-) False cep104
TU93213 other upstream 795117 11097002 ~ 11131207 (-) False LOC122349915

Expression Profile