RNA id: CI01000032_04115597_04116265.mRNA


Basic Information

Item Value
RNA id CI01000032_04115597_04116265.mRNA
length 720
RNA type mRNA
GC content 0.47
exon number 1
gene id CI01000032_04115597_04116265
representative True

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 4115597 ~ 4116316 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGCAAGTTTAATTCAAGACTCAATTAAGCCGTTACAAGCCTCCCTTGACACGCTGTGTGAGACAGTAAGCTCGTTTCAGCACCGACTTGCATCTACTGAAGCACTGGTCGGCAAAAACTTCGAAAGGCTAGTCGCCGCGGAAGCGACGATTAAATCCTTGAAAGCACAGAACTCATCTCTTCTCGACCAAATTGACGACCTGCATATTATTAATATTCCGGAAGGCGCCAAAGTTGGAAAAGACACTATCGGATTTCAATCTGGGCGGCTTAAAGATACCATGGAGAGCGTGTTTGACAAACCTCCTGAACTTGAGCGAGTGCATCGCTCACTTCGCCCCAAACCTGGAGCAGGGCAACCTCCAAGACCATTCATCGTCTGCTTCCACCGTTTTCAGGAAAAGGAAAAGGCACTTCACTGGGCCAGGCGACATGATATTAAATTCAACGGAGTGTCACTGAGGTTATACCCGGATACAAGCGCAGCGCTGGCGAAGAAATGCGGCGGATTCAAAGAAGTCAAACAATCCCTCTATCAGAAAGGCATAAAGTTTCAACTTCTGTGCCCTGCCCGTCTCCGTGTGAAATTCAGAGAGGAAACTCACACTTTTGATTCACTGGAGGCTGCTGAGTCTTTTTATAAACAACGCATCCTTGTACAGGACTAAAGACCGGTTCTGACTGTAATACATTGTCTGTGAAGTTATACGACAAACACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU190101 lncRNA upstream 110228 4004929 ~ 4005369 (+) True G167327
TU190092 lncRNA upstream 110793 4003738 ~ 4004804 (+) False G167325
TU190095 lncRNA upstream 110848 4003583 ~ 4004749 (+) False G167325
TU190088 lncRNA upstream 110848 4003738 ~ 4004749 (+) False G167325
TU190097 lncRNA upstream 110848 4003839 ~ 4004749 (+) True G167325
TU190178 lncRNA downstream 29803 4146119 ~ 4146336 (+) True G167404
CI01000032_03959089_03961976.mRNA mRNA upstream 153387 3958939 ~ 3962210 (+) False CI01000032_03959089_03961976
CI01000032_03535729_03536058.mRNA mRNA upstream 578734 3535729 ~ 3536863 (+) True CI01000032_03535729_03536058
CI01000032_03326549_03327076.mRNA mRNA upstream 786733 3326549 ~ 3328864 (+) False CI01000032_03326549_03327076
CI01000032_03323107_03325296.mRNA mRNA upstream 789960 3323107 ~ 3325637 (+) True CI01000032_03323107_03325296
CI01000032_03210864_03212974.mRNA mRNA upstream 901433 3210864 ~ 3214164 (+) True CI01000032_03210864_03212974
CI01000032_04142554_04144115.mRNA mRNA downstream 22970 4139286 ~ 4144298 (+) True CI01000032_04142554_04144115
TU189458 other upstream 1158384 2956788 ~ 2957213 (+) True G166765
TU189420 other upstream 1265913 2835622 ~ 2849684 (+) True G166734
TU189422 other upstream 1266010 2835314 ~ 2849587 (+) False G166734
TU188377 other upstream 1339549 2775093 ~ 2776048 (+) True G165833
TU188379 other upstream 1340261 2758732 ~ 2775336 (+) False G165833

Expression Profile