RNA id: TU344339


Basic Information

Item Value
RNA id TU344339
length 392
RNA type TUCP
GC content 0.56
exon number 1
gene id G303132
representative True

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 1052623 ~ 1053014 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAGAGCTCACCAGATTCCTACGCACTTACTGCCAACAAAATCAAAATGACTGGAGTCGTTACCTGATGTGGGCGGAATACGCACAAAACTCTCTCCAGAAAGCCGCCACCGGCGTGACTCCCTTCAAATGTGTACTTGGCTACCAGCCACCACTTTTCCCTTGGTCCGGCGAACCCACCAATCTACCATCCGTGACAGAGTGGCTGCAACGCAGTGAGGAAACCTGGGACCTCGCCCATCACCATCTGCAGCGCGCTGTGAGAAGGCAGGAGGTACAGGCCAATCGTCACCGGCGTCCCAGTCCAGAGTACACCGTGGGCCAATGGGTCTGGCTATCCACACGAGATCTCCGCCTCCGACTTCCATGCAGAAAGCTCAGTCCCAGGTTTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU344325 lncRNA upstream 44272 1007975 ~ 1008351 (+) True G303118
TU344060 lncRNA upstream 45652 1006338 ~ 1006971 (+) True G302900
TU344011 lncRNA upstream 114743 936844 ~ 937880 (+) True G302858
TU343909 lncRNA upstream 257794 768068 ~ 769294 (+) True G302767
TU343897 lncRNA upstream 302007 750159 ~ 750616 (+) True G302756
TU344343 lncRNA downstream 4123 1057137 ~ 1057382 (+) True G303136
TU344354 lncRNA downstream 22105 1075119 ~ 1075426 (+) True G303147
TU344366 lncRNA downstream 33655 1086669 ~ 1088891 (+) True G303159
TU344368 lncRNA downstream 38624 1091638 ~ 1093760 (+) False G303161
TU344369 lncRNA downstream 38624 1091638 ~ 1092423 (+) True G303161
CI01000091_00958756_00963695.mRNA mRNA upstream 88580 958641 ~ 964043 (+) True CI01000091_00958756_00963695
CI01000091_00893581_00897135.mRNA mRNA upstream 155483 893119 ~ 897140 (+) True CI01000091_00893581_00897135
CI01000091_00844497_00846211.mRNA mRNA upstream 206251 844437 ~ 846372 (+) True CI01000091_00844497_00846211
CI01000091_00791956_00794999.mRNA mRNA upstream 257620 791560 ~ 795003 (+) False CI01000091_00791956_00794999
CI01000091_00784583_00790474.mRNA mRNA upstream 262139 784263 ~ 790484 (+) True CI01000091_00784583_00790474
CI01000091_01066118_01104145.mRNA mRNA downstream 12490 1065504 ~ 1104308 (+) True CI01000091_01066118_01104145
CI01000091_01168029_01169885.mRNA mRNA downstream 115015 1168029 ~ 1170370 (+) True CI01000091_01168029_01169885
CI01000091_01194555_01249090.mRNA mRNA downstream 141541 1194555 ~ 1249340 (+) True CI01000091_01194555_01249090
CI01000091_01249406_01250775.mRNA mRNA downstream 196342 1249356 ~ 1251361 (+) True CI01000091_01249406_01250775
CI01000091_01265220_01283983.mRNA mRNA downstream 211930 1264944 ~ 1284290 (+) True CI01000091_01265220_01283983
TU343910 other upstream 95591 955910 ~ 957032 (+) True G302768
TU343815 other upstream 463097 586912 ~ 589526 (+) True G302679
TU343606 other upstream 990456 59635 ~ 62167 (+) True G302512

Expression Profile