RNA id: TCONS_00017537


Basic Information

Item Value
RNA id TCONS_00017537
length 62
RNA type snoRNA
GC content 0.44
exon number 1
gene id XLOC_008873
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 425695 ~ 425756 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGTCAATGATGAGAACTAGCCaaatctgagtgtgtgtgtcacaCCACTGATTATTTGCGAGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000188349

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019094 lncRNA downstream 47508 374380 ~ 378187 (-) True XLOC_008871
TCONS_00018807 lncRNA downstream 47729 374380 ~ 377966 (-) False XLOC_008871
TCONS_00017534 lncRNA downstream 135188 282731 ~ 290507 (-) True XLOC_008869
TCONS_00017533 lncRNA downstream 136118 282731 ~ 289577 (-) False XLOC_008869
TCONS_00017532 lncRNA downstream 136118 282731 ~ 289577 (-) False XLOC_008869
TCONS_00018808 lncRNA upstream 2663 428419 ~ 429647 (-) True XLOC_008874
TCONS_00019095 lncRNA upstream 8340 434096 ~ 436443 (-) False XLOC_008875
TCONS_00019096 lncRNA upstream 8687 434443 ~ 436530 (-) False XLOC_008875
TCONS_00019097 lncRNA upstream 8706 434462 ~ 436530 (-) True XLOC_008875
TCONS_00017552 lncRNA upstream 166838 592594 ~ 595263 (-) False XLOC_008883
TCONS_00017536 mRNA downstream 6098 413543 ~ 419597 (-) True XLOC_008872
TCONS_00017531 mRNA downstream 172882 168002 ~ 252813 (-) True XLOC_008867
TCONS_00017530 mRNA downstream 262109 119057 ~ 163586 (-) True XLOC_008866
TCONS_00017529 mRNA downstream 317281 105955 ~ 108414 (-) True XLOC_008865
TCONS_00017527 mRNA downstream 317795 102925 ~ 107900 (-) False XLOC_008865
TCONS_00017538 mRNA upstream 7279 433035 ~ 434503 (-) False XLOC_008875
TCONS_00017539 mRNA upstream 23341 449097 ~ 452347 (-) True XLOC_008876
TCONS_00017540 mRNA upstream 28593 454349 ~ 462783 (-) True XLOC_008877
TCONS_00017541 mRNA upstream 38473 464229 ~ 477223 (-) True XLOC_008878
TCONS_00017542 mRNA upstream 74092 499848 ~ 506010 (-) True XLOC_008879
TCONS_00017535 other downstream 76128 349451 ~ 349567 (-) True XLOC_008870
TCONS_00017597 other upstream 896034 1321790 ~ 1321906 (-) True XLOC_008910
TCONS_00017627 other upstream 1409215 1834971 ~ 1837883 (-) True XLOC_008922
TCONS_00017639 other upstream 1840213 2265969 ~ 2266083 (-) True XLOC_008927
TCONS_00017647 other upstream 2199272 2625028 ~ 2625663 (-) True XLOC_008933
TCONS_00017655 other upstream 2310627 2736383 ~ 2736498 (-) True XLOC_008940