RNA id: TCONS_00017882


Basic Information

Item Value
RNA id TCONS_00017882
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_009076
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14635669 ~ 14635785 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

acacacacacataacaccctgcagcccaagaccagttacttactaaagctaagcagggctaagcctggtcaatacctggatgggtgaccacatggtaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176743

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00017870 lncRNA downstream 387622 14246090 ~ 14248047 (-) True XLOC_009069
TCONS_00019132 lncRNA downstream 403599 14229248 ~ 14232070 (-) True XLOC_009068
TCONS_00019131 lncRNA downstream 571319 14062613 ~ 14064350 (-) True XLOC_009063
TCONS_00017856 lncRNA downstream 571367 14062613 ~ 14064302 (-) False XLOC_009063
TCONS_00019130 lncRNA downstream 1427257 13206623 ~ 13208412 (-) True XLOC_009060
TCONS_00017885 lncRNA upstream 44270 14680055 ~ 14696775 (-) True XLOC_009077
TCONS_00017888 lncRNA upstream 247506 14883291 ~ 14884061 (-) True XLOC_009080
TCONS_00019133 lncRNA upstream 392427 15028212 ~ 15030391 (-) True XLOC_009081
TCONS_00017892 lncRNA upstream 588546 15224331 ~ 15227050 (-) True XLOC_009082
TCONS_00018816 lncRNA upstream 667942 15303727 ~ 15307733 (-) False XLOC_009083
TCONS_00017880 mRNA downstream 10296 14602520 ~ 14625373 (-) True XLOC_009074
TCONS_00017879 mRNA downstream 45992 14554298 ~ 14589677 (-) True XLOC_009073
TCONS_00017875 mRNA downstream 83568 14436159 ~ 14552101 (-) False XLOC_009072
TCONS_00017878 mRNA downstream 149135 14436613 ~ 14486534 (-) True XLOC_009072
TCONS_00017877 mRNA downstream 165965 14436613 ~ 14469704 (-) False XLOC_009072
TCONS_00017883 mRNA upstream 39143 14674928 ~ 14755236 (-) False XLOC_009077
TCONS_00017884 mRNA upstream 40335 14676120 ~ 14755318 (-) False XLOC_009077
TCONS_00017886 mRNA upstream 141069 14776854 ~ 14780602 (-) True XLOC_009078
TCONS_00017887 mRNA upstream 239941 14875726 ~ 14884332 (-) True XLOC_009079
TCONS_00017889 mRNA upstream 585338 15221123 ~ 15230264 (-) False XLOC_009082
TCONS_00017874 other downstream 320199 14315354 ~ 14315470 (-) True XLOC_009071
TCONS_00017866 other downstream 441773 14185388 ~ 14193896 (-) False XLOC_009066
TCONS_00017858 other downstream 552556 14076539 ~ 14083113 (-) False XLOC_009064
TCONS_00017854 other downstream 811065 13824472 ~ 13824604 (-) True XLOC_009061
TCONS_00017830 other downstream 2659409 11976143 ~ 11976260 (-) True XLOC_009050
TCONS_00017891 other upstream 585698 15221483 ~ 15224702 (-) False XLOC_009082
TCONS_00017896 other upstream 748113 15383898 ~ 15383983 (-) True XLOC_009086
TCONS_00017917 other upstream 1323591 15959376 ~ 15960468 (-) True XLOC_009094
TCONS_00017936 other upstream 2158326 16794111 ~ 16872600 (-) True XLOC_009108
TCONS_00017944 other upstream 2425792 17061577 ~ 17071246 (-) False XLOC_009112

Expression Profile

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