RNA id: TCONS_00001450


Basic Information

Item Value
RNA id TCONS_00001450
length 1538
RNA type mRNA
GC content 0.55
exon number 8
gene id XLOC_000910
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 160302 ~ 206208 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GATAAGAGTGTGTTGGTCAGATGATGGTCAgcctctgtcacacacacactgatggagAAGTTCCAGGCGGCGATGGTTCTGGGAGCGGTGGGAGACGCGCTGGGCTCCCGCTGGCAGACCTGCAGCTCGGGCTCTCAGATCCAGCAGGAGCTCCGGGCCCTCGGGGGACTCGCGGCCCTTAAACTGGATGCAGAACACTGGCCACTGAGTGACGGAGCCCTGATGCACATGACCACCGCTGAGGCCCTGATCACTGattACTGGTGTCTGGAGGATCTGTACCGTGAGCTGGTGCGGCTCTATGTGGAGGCCATGGTGAGTCTGCAGGGTCGAGTCCCGGAGCCCAGCACTGTGGAGGGCTGTGCAAACCTCAAACCACACAACTTCCTGCTGGCCTGGCACACACCCTTCAACGAGAAAGGTTCTGGTCACGGAGCCGCCACTAAAGCCATGTGTATAGGGATGCGCTACTGGCAGCCGGAGCGGCTTCACACATTGGTGGAAGTGAGCATCGAGGCAGGCCGAATGACCCACAACCACCCCATAGGGTTTCTGGGCTCTCTCTGCACGGCTCTCTTCGCCTCGTTCGCAGTGCAGGGCCGTCCGCTGGTCAGCTGGGGTCGAGAGCTCCTGAAGACGCTCCCCAAAGCAGAGGAGTACTGCAGGAAGACCATCCGCCACATGGCAGAGTACCAGGAGACGTGGTTCTACTTCGAGGCCAAGTGGCAGTTTTATCTGGAGGAGCGCGGGATTGAAGACGGACAGAGCAAACCCTCCTTTCCTGAGAGATACGACGCAGACGAGACGGACAGGATGTATAAGCGCTGGAGTTCTGAGGGCTGTGCGGGTCGGCGGGGTCACGACGCTCCAATGATCGCGTATGATGCTCTGCTGGCGGCCGGATCCGACTGGGAGGAACTCTGCAGACGCGCTATACTGCAcggaggagagAGCAGTGCTACAGGTCTGATCTCCGGCTGTCTGTTCGGGCTCCTCCATGGCCTCAGTGCGGCCCCCACCGGCCTCCATCAGGATCTGGACAGGAGAGAGAAACTGCAGGACCTGGGAGAGCGACTGTACCGAGCAGCGGCGCTAGAGAAGTAAAGCGACACACGGACACGCGCACGCACATGCGCacgcacatgcgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatgcacattattAGTGTTTCTCTGATCAATCTAATTGACATTATACACGTAAAACAGCTACTCAATCTGTTATTGTTCAACCTAAAGTGCTCTTCATGCTTTTGTAAGTGATGTTTTGGTCATAAATGTAAAGCATCACTGTATATTTAATGAAAACGAGAATCAGACAAGCTGTCAATCATGTGGGAGGCTTTGACCCCAGGGGTGGAGTTTAGAATAGGGGAGTGGTCGAACATATATGGGCGGGACTTGTTTGTGGATTTCAAACGCATGTATTTTGAATATTCATTAAGTAATTAAAGATTGATTTGAAGTCTT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041010-126 Predicted to enable ADP-ribosylarginine hydrolase activity and magnesium ion binding activity. Predicted to act upstream of or within protein de-ADP-ribosylation. Is expressed in heart; heart rudiment; and heart tube. Orthologous to human ADPRHL1 (ADP-ribosylhydrolase like 1).

Ensembl:

ensembl_id ENSDART00000060968

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00002894 lncRNA downstream 8309 189734 ~ 191985 (-) True XLOC_000911
TCONS_00003287 lncRNA downstream 42740 153238 ~ 157554 (-) False XLOC_000909
TCONS_00001443 lncRNA downstream 42740 153643 ~ 157554 (-) False XLOC_000909
TCONS_00001446 lncRNA downstream 42761 155770 ~ 157533 (-) True XLOC_000909
TCONS_00003288 lncRNA downstream 42763 154086 ~ 157531 (-) False XLOC_000909
TCONS_00002896 lncRNA upstream 2921 209129 ~ 210813 (-) True XLOC_000912
TCONS_00001454 lncRNA upstream 137409 343617 ~ 345895 (-) False XLOC_000914
TCONS_00001463 lncRNA upstream 273599 479807 ~ 484588 (-) False XLOC_000918
TCONS_00001467 lncRNA upstream 305563 511771 ~ 513717 (-) True XLOC_000919
TCONS_00001475 lncRNA upstream 414782 620990 ~ 622179 (-) False XLOC_000923
TCONS_00001449 mRNA downstream 8261 184916 ~ 192033 (-) False XLOC_000911
TCONS_00001448 mRNA downstream 8323 184915 ~ 191971 (-) False XLOC_000911
TCONS_00001440 mRNA downstream 42731 152007 ~ 157563 (-) False XLOC_000909
TCONS_00001441 mRNA downstream 43919 152316 ~ 156375 (-) False XLOC_000909
TCONS_00001435 mRNA downstream 128771 65705 ~ 71523 (-) False XLOC_000906
TCONS_00001451 mRNA upstream 1973 208181 ~ 214911 (-) False XLOC_000912
TCONS_00001452 mRNA upstream 106576 312784 ~ 338445 (-) True XLOC_000913
TCONS_00001453 mRNA upstream 137084 343292 ~ 354166 (-) False XLOC_000914
TCONS_00001455 mRNA upstream 144632 350840 ~ 354115 (-) True XLOC_000914
TCONS_00001456 mRNA upstream 151310 357518 ~ 411331 (-) True XLOC_000915
TCONS_00001442 other downstream 46448 153238 ~ 153846 (-) False XLOC_000909
TCONS_00001429 other downstream 150459 47954 ~ 49835 (-) False XLOC_000904
TCONS_00001421 other downstream 155748 42204 ~ 44546 (-) False XLOC_000903
TCONS_00001460 other upstream 261535 467743 ~ 471925 (-) True XLOC_000917
TCONS_00001476 other upstream 414817 621025 ~ 625080 (-) False XLOC_000923
TCONS_00001485 other upstream 844733 1050941 ~ 1051057 (-) True XLOC_000930
TCONS_00001486 other upstream 1107397 1313605 ~ 1315753 (-) True XLOC_000932
TCONS_00001492 other upstream 1664653 1870861 ~ 1875118 (-) False XLOC_000939

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000299_06223295_06227054.mRNA True 1576 mRNA 0.54 7 CI01000299 6222892 ~ 6227186 (+)
bowfin (Amia calva) AMCG00014431 True 6485 mRNA 0.43 7 CM030128.1 13853162 ~ 13864850 (-)