Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000299_02696797_02704180.mRNA |
| length | 1732 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | CI01000299_02696797_02704180 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 2696632 ~ 2704220 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K07374 | TUBA; tubulin alpha |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU465854 | lncRNA | upstream | 41219 | 2655180 ~ 2655413 (+) | True | G405366 |
| TU465853 | lncRNA | upstream | 43016 | 2653406 ~ 2653616 (+) | True | G405365 |
| TU465852 | lncRNA | upstream | 43479 | 2652908 ~ 2653153 (+) | True | G405364 |
| TU465850 | lncRNA | upstream | 51779 | 2644549 ~ 2644853 (+) | True | G405362 |
| TU465849 | lncRNA | upstream | 52173 | 2644092 ~ 2644459 (+) | True | G405361 |
| TU465873 | lncRNA | downstream | 16642 | 2720862 ~ 2721324 (+) | True | G405385 |
| TU465878 | lncRNA | downstream | 26053 | 2730273 ~ 2730509 (+) | True | G405390 |
| TU465895 | lncRNA | downstream | 106232 | 2810452 ~ 2810672 (+) | True | G405407 |
| TU466103 | lncRNA | downstream | 504706 | 3208926 ~ 3209411 (+) | True | G405611 |
| TU466111 | lncRNA | downstream | 616304 | 3320524 ~ 3321012 (+) | True | G405618 |
| CI01000299_02612562_02613926.mRNA | mRNA | upstream | 81840 | 2612499 ~ 2614792 (+) | True | CI01000299_02612562_02613926 |
| CI01000299_02195854_02198465.mRNA | mRNA | upstream | 497707 | 2195798 ~ 2198925 (+) | True | CI01000299_02195854_02198465 |
| CI01000299_02118245_02120332.mRNA | mRNA | upstream | 574774 | 2116861 ~ 2121858 (+) | True | CI01000299_02118245_02120332 |
| CI01000299_01855614_01858092.mRNA | mRNA | upstream | 837929 | 1855614 ~ 1858703 (+) | True | CI01000299_01855614_01858092 |
| CI01000299_01197545_01215711.mRNA | mRNA | upstream | 1480643 | 1197422 ~ 1215989 (+) | False | CI01000299_01197545_01215711 |
| CI01000299_02706136_02711943.mRNA | mRNA | downstream | 1653 | 2705873 ~ 2713740 (+) | True | CI01000299_02706136_02711943 |
| CI01000299_02753238_02760499.mRNA | mRNA | downstream | 49018 | 2753238 ~ 2760953 (+) | True | CI01000299_02753238_02760499 |
| CI01000299_02813216_02818668.mRNA | mRNA | downstream | 108921 | 2813141 ~ 2819096 (+) | True | CI01000299_02813216_02818668 |
| CI01000299_03144958_03149338.mRNA | mRNA | downstream | 440170 | 3144390 ~ 3149340 (+) | True | CI01000299_03144958_03149338 |
| CI01000299_03157191_03166687.mRNA | mRNA | downstream | 452971 | 3157191 ~ 3166701 (+) | True | CI01000299_03157191_03166687 |
| TU464370 | other | upstream | 2090282 | 604870 ~ 606350 (+) | True | G403972 |
| TU463930 | other | upstream | 2285844 | 364139 ~ 410788 (+) | True | G403609 |
| TU463894 | other | upstream | 2624361 | 35462 ~ 72271 (+) | True | G403578 |
| TU466101 | other | downstream | 450377 | 3154597 ~ 3155174 (+) | True | G405609 |
| TU466041 | other | downstream | 1427038 | 4131258 ~ 4133941 (+) | True | CI01000299_04131136_04133439 |
| TU466350 | other | downstream | 1591313 | 4295533 ~ 4320141 (+) | True | G405842 |
| TU466383 | other | downstream | 1785598 | 4505404 ~ 4505917 (+) | True | G405866 |
| TU466374 | other | downstream | 1998162 | 4702382 ~ 4702508 (+) | True | G405864 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00000116 | False | 1616 | mRNA | 0.54 | 4 | NC_007112.7 | 5402476 ~ 5419116 (+) |
| bowfin (Amia calva) | AMCG00001311 | True | 2364 | mRNA | 0.51 | 4 | CM030137.1 | 24480969 ~ 24490636 (+) |
