RNA id: TU2678285


Basic Information

Item Value
RNA id TU2678285
length 453
RNA type TUCP
GC content 0.42
exon number 2
gene id G2339343
representative True

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 97115 ~ 97856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

agacaaaacacacatcatgacgagagagacaaaacacatcacgacaagagagacaaaacacacatcacgacaagagagacaaaacacacatcacgacaagagagacaaaacacacatcacgacaagagagacaaaacacacatcacgacaagagagacaaaacacacatcacaacaagagagacaaaacacacatcacgacgagagagacaaaacacacatcacgacaagagagacaaaacacacatcacgacaagagagaaaaaaaaacacatcacgacaagagaaacaaaacacacatcacgacaagagggacactacaacactacataagacTGAGACACCAACACAACATGaaaacatggcagcaacacatgaaaacatggCAGCATGTGTTGTGTCCTGTCTCCAGGTTACAGTGTGTATTGTCCTGTCTCCAGGTTATAGTGTGTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2678281 lncRNA upstream 11720 85065 ~ 85395 (+) True G2339339
TU2678276 lncRNA upstream 18608 78189 ~ 78507 (+) True G2339334
TU2678271 lncRNA upstream 40025 56851 ~ 57090 (+) True G2339330
TU2678268 lncRNA upstream 48672 48224 ~ 48443 (+) True G2339327
TU2678264 lncRNA upstream 56421 40477 ~ 40694 (+) True G2339323
TU2678286 lncRNA downstream 664 98520 ~ 99492 (+) True G2339344
TU2678295 lncRNA downstream 14222 112078 ~ 115154 (+) True G2339352
TU2678301 lncRNA downstream 22713 120569 ~ 121320 (+) True G2339356
TU2678312 lncRNA downstream 29443 127299 ~ 131681 (+) True G2339358
TU2678342 lncRNA downstream 62994 160850 ~ 161758 (+) False G2339371
XM_036972373.1 mRNA downstream 9213 107069 ~ 305241 (+) False LOC118947131
XM_036972374.1 mRNA downstream 9213 107069 ~ 305241 (+) True LOC118947131
XR_005041782.1 mRNA downstream 497647 595503 ~ 596337 (+) True LOC118947129
XM_036972394.1 mRNA downstream 664723 762579 ~ 768787 (+) True LOC110495334
XM_036972370.1 mRNA downstream 713631 811487 ~ 817121 (+) False si:ch73-41e3.7
TU2678479 other downstream 365342 463198 ~ 464467 (+) True G2339478
TU2678903 other downstream 585488 683344 ~ 685548 (+) True G2339795
TU2679051 other downstream 773251 871107 ~ 873839 (+) False G2339912
TU2679060 other downstream 773251 871107 ~ 873839 (+) False G2339912
TU2679067 other downstream 773251 871107 ~ 873839 (+) False G2339912

Expression Profile