Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU156048 |
| length | 295 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G132081 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 13500389 ~ 13500683 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU155890 | lncRNA | upstream | 60659 | 13437922 ~ 13439730 (+) | True | G131947 |
| TU155891 | lncRNA | upstream | 63431 | 13435501 ~ 13436958 (+) | True | G131948 |
| TU155938 | lncRNA | upstream | 65095 | 13433917 ~ 13435294 (+) | True | G131987 |
| TU155931 | lncRNA | upstream | 78175 | 13420705 ~ 13422214 (+) | True | G131980 |
| TU155919 | lncRNA | upstream | 100109 | 13392525 ~ 13400280 (+) | True | G131972 |
| TU156088 | lncRNA | downstream | 69709 | 13570392 ~ 13570972 (+) | True | G132115 |
| TU156119 | lncRNA | downstream | 289788 | 13790471 ~ 13791279 (+) | False | LOC113527348 |
| TU156121 | lncRNA | downstream | 291179 | 13791862 ~ 13792709 (+) | True | G132139 |
| TU156118 | lncRNA | downstream | 292473 | 13793156 ~ 13794305 (+) | True | G132136 |
| TU156120 | lncRNA | downstream | 293899 | 13794582 ~ 13799616 (+) | True | G132138 |
| XM_026912780.2 | mRNA | upstream | 10390 | 13464131 ~ 13489999 (+) | True | si:dkey-70p6.1 |
| XM_026912789.2 | mRNA | upstream | 10390 | 13464131 ~ 13489999 (+) | False | si:dkey-70p6.1 |
| XM_026926538.2 | mRNA | upstream | 114004 | 13372493 ~ 13386385 (+) | False | tpd52l2a |
| XM_034306380.1 | mRNA | downstream | 23038 | 13523721 ~ 13541674 (+) | False | emilin3a |
| XM_026924721.2 | mRNA | downstream | 36728 | 13537411 ~ 13541674 (+) | True | emilin3a |
| XM_026913672.2 | mRNA | downstream | 115921 | 13616604 ~ 13685739 (+) | False | magixa |
| XM_026913655.2 | mRNA | downstream | 115924 | 13616607 ~ 13688929 (+) | False | magixa |
| XM_026913646.2 | mRNA | downstream | 115925 | 13616608 ~ 13688929 (+) | True | magixa |
| trnae-cuc_18 | other | upstream | 130770 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 436267 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnav-cac_9 | other | upstream | 438381 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnad-guc_1 | other | upstream | 1118319 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU154763 | other | upstream | 1789844 | 11709454 ~ 11710545 (+) | False | porcn |
| TU156117 | other | downstream | 204573 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| TU156645 | other | downstream | 821489 | 14322172 ~ 14323450 (+) | True | G132595 |
| trnae-cuc_19 | other | downstream | 1479150 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU157849 | other | downstream | 2501378 | 16002061 ~ 16011604 (+) | False | G133631 |
| TU157866 | other | downstream | 2501378 | 16002061 ~ 16018783 (+) | True | G133631 |
