Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU445848 |
| length | 925 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G376488 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 15491046 ~ 15492575 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU445818 | lncRNA | upstream | 36116 | 15453881 ~ 15454930 (+) | True | G376474 |
| TU445800 | lncRNA | upstream | 90642 | 15396732 ~ 15400404 (+) | False | jag1a |
| TU445797 | lncRNA | upstream | 105537 | 15328982 ~ 15385509 (+) | True | G376455 |
| TU445740 | lncRNA | upstream | 305064 | 15184509 ~ 15185982 (+) | True | G376405 |
| TU445747 | lncRNA | upstream | 335565 | 15155254 ~ 15155481 (+) | True | G376412 |
| TU445867 | lncRNA | downstream | 27314 | 15519832 ~ 15520147 (+) | True | G376497 |
| TU445869 | lncRNA | downstream | 29574 | 15522092 ~ 15522635 (+) | True | G376499 |
| TU445900 | lncRNA | downstream | 82312 | 15574830 ~ 15575485 (+) | True | G376522 |
| TU445910 | lncRNA | downstream | 107847 | 15600365 ~ 15601679 (+) | True | G376531 |
| TU445933 | lncRNA | downstream | 131770 | 15624288 ~ 15625372 (+) | True | G376546 |
| XM_034300209.1 | mRNA | upstream | 17243 | 15456929 ~ 15473803 (+) | True | LOC113537703 |
| XM_034300208.1 | mRNA | upstream | 17243 | 15457196 ~ 15473803 (+) | False | LOC113537703 |
| XM_026931807.2 | mRNA | upstream | 37498 | 15439888 ~ 15453548 (+) | True | psen2 |
| XM_026931801.2 | mRNA | upstream | 91152 | 15365799 ~ 15399894 (+) | True | jag1a |
| XM_026931802.2 | mRNA | upstream | 91152 | 15365799 ~ 15399894 (+) | False | jag1a |
| XM_034300095.1 | mRNA | downstream | 9391 | 15501909 ~ 15549245 (+) | True | tsc2 |
| XM_026932048.2 | mRNA | downstream | 161003 | 15653521 ~ 15676223 (+) | True | LOC113537529 |
| XM_034300322.1 | mRNA | downstream | 161003 | 15653521 ~ 15659363 (+) | False | LOC113537529 |
| XM_026932047.2 | mRNA | downstream | 161005 | 15653523 ~ 15676222 (+) | False | LOC113537529 |
| XM_026932046.2 | mRNA | downstream | 161006 | 15653524 ~ 15676222 (+) | False | LOC113537529 |
| TU445810 | other | upstream | 66248 | 15421399 ~ 15424798 (+) | True | G376467 |
| trnaq-cug_18 | other | upstream | 141721 | 15349254 ~ 15349325 (+) | True | trnaq-cug_18 |
| TU445724 | other | upstream | 374190 | 15114472 ~ 15116856 (+) | False | smdt1b |
| TU445701 | other | upstream | 399565 | 15079740 ~ 15091481 (+) | False | rfx1b |
| TU444908 | other | upstream | 1448432 | 14023250 ~ 14042614 (+) | False | G375711 |
| XR_004577303.1 | other | downstream | 274718 | 15767236 ~ 15779586 (+) | False | LOC113537434 |
| TU446276 | other | downstream | 282663 | 15775181 ~ 15779556 (+) | False | LOC113537434 |
| TU446396 | other | downstream | 468878 | 15961396 ~ 15964305 (+) | True | c26h19orf53 |
| TU446639 | other | downstream | 743095 | 16235613 ~ 16239937 (+) | True | LOC117596135 |
| XR_004577301.1 | other | downstream | 798212 | 16290730 ~ 16316385 (+) | False | LOC113537689 |
