RNA id: AMCG00014097


Basic Information

Item Value
RNA id AMCG00014097
length 1149
RNA type mRNA
GC content 0.69
exon number 1
gene id AMCG00014097
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1537057 ~ 1538205 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGCTGCTCCCGGCTGCTGTGCCTCCCGCCCCTGAGGCTCCGCCGGGccccactgctgctgctgcgccCCCCCGCCCGCTGGCTCTCCGGCTACAGGGCGCACCGCAGTCTGCAGGAGAGCTACCGGCTGCTTCAGCTGCCTGAGGGTGGGGGCAGCACCCCTGCGCAGGTGAAGGAGGCCTATCTGCGCCTGGCCAAGCAGTACCACCCCGACAGCGGAACAGCTGGCGCTGATGCGGGCAAGTTCTCCCAGCTGGAGGTGGCGTACAGGGCCGTGCTGGCACACCTCGCCCAGCAAAGAGAGCCCCGGCGCCGGGAGGCGGAGGAGGCGGagcagggggaggaggaggacaggtCCAGGCTGCAGGCGCCGCAGCACAGGCAGTACCTGAGTTTCGAGGGTGTGGGCTATGGGACGCCCAGCCAGCGAGAGCGGCAGTACCGGCAGATCCGCGTGGACCGGGCTACGGATCAGGTGCTGGAGTACCGGCGGCGGGAGCTGGAGCGGCAGTGTGTGGCAGAGGAGGGCGAAGGGGCGCTGGTGGCCCAGGAAGTGCGCCGGCGCAGCAGGCAGGCGAAGATTACACAGGCGGTGGAGCGGCTGGTGGAGGACCTGATCCAGGAGTCCATGTCCCGGGGCGACTTCCGCAACCTGAGCGGTGCGGGCCGGCCCCTCCAGAAGTTCAGCCACAACCCCTACGTGGACCCCATGACGCACAATCTCAACCGCATCCTCATCGACAACGGCTACCAGCCCCGGTGGATCGTAGCACAGAAGGAGATCCGCGAGACGCTGGAGCGGCTGCGGGCCGAGCTGCTGGCTGCCAGGGGGCGCCTGGGGGACCCGCCTTTGCCCGCAGAGCAGCGCTGCTGGCAGCAGCACAGGCAGGCCTTTGCGGAGGAGCTGGCCCAGCTCAACAAGAAGGTGGATGGCTTCAACCTGATCGTGCCGCTGCTCTCGCGCCAGATGGTCCACTTCAGCGTGGAGAAGGAGCTGAGCAGGGCGGTGAGCGCCGACCAGCAGAGGAGGGCGGAGCGGGAGAGAGCGGAGGAGAGCCAGAGGAAGGAACAGAGGGAGGAACGGAGGGAGGAGGGCCGCGCGGGGCTGAGCGGACTCTTGTCCTGGATACAGAGCCTGCTCAAGTGA

Function

GO: NA

KEGG:

id description
K19373 DNAJC28; DnaJ homolog subfamily C member 28

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84536 lncRNA downstream 439078 1097656 ~ 1097979 (-) True G67691
TU84530 lncRNA downstream 665430 871053 ~ 871627 (-) True G67686
TU84499 lncRNA downstream 1035272 500007 ~ 501785 (-) True G67658
TU84487 lncRNA downstream 1150116 386733 ~ 386941 (-) True G67646
TU84477 lncRNA downstream 1190932 344414 ~ 346125 (-) True G67638
TU84597 lncRNA upstream 26582 1564787 ~ 1566340 (-) False AMCG00014098
TU84693 lncRNA upstream 282407 1820612 ~ 1821759 (-) False G67818
TU84694 lncRNA upstream 282407 1820612 ~ 1821759 (-) True G67818
TU84715 lncRNA upstream 340998 1879203 ~ 1882950 (-) False AMCG00014108
TU84744 lncRNA upstream 403822 1942027 ~ 1942420 (-) True G67849
AMCG00014090 mRNA downstream 82440 1453775 ~ 1454617 (-) True AMCG00014090
AMCG00014091 mRNA downstream 124210 1391356 ~ 1412847 (-) True AMCG00014091
AMCG00014082 mRNA downstream 256660 1267242 ~ 1280397 (-) True AMCG00014082
AMCG00014080 mRNA downstream 304456 1231624 ~ 1232601 (-) True AMCG00014080
AMCG00014081 mRNA downstream 324287 1210744 ~ 1212770 (-) True AMCG00014081
AMCG00014098 mRNA upstream 26573 1564778 ~ 1569929 (-) True AMCG00014098
AMCG00014105 mRNA upstream 332032 1870237 ~ 1873422 (-) True AMCG00014105
AMCG00014108 mRNA upstream 341003 1879208 ~ 1885432 (-) True AMCG00014108
AMCG00014109 mRNA upstream 357460 1895665 ~ 1898909 (-) True AMCG00014109
AMCG00014107 mRNA upstream 365211 1903416 ~ 1903733 (-) True AMCG00014107
TU84527 other downstream 746100 790528 ~ 790957 (-) True G67683
TU84434 other downstream 1365843 61992 ~ 171214 (-) False G67612
TU84686 other upstream 263457 1801662 ~ 1869448 (-) False G67813
TU84687 other upstream 268464 1806669 ~ 1869448 (-) False G67813
TU84705 other upstream 301960 1840165 ~ 1842445 (-) True G67825
TU84703 other upstream 321337 1859542 ~ 1863693 (-) True G67824
TU84685 other upstream 328189 1866394 ~ 1869448 (-) True G67813

Expression Profile