RNA id: AMCG00014634


Basic Information

Item Value
RNA id AMCG00014634
length 408
RNA type mRNA
GC content 0.52
exon number 9
gene id AMCG00014634
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 23765078 ~ 24324642 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAACAGGCATAGAGTGAAGCTGCTGAAGGCCAGGTTCGACAGTGGAGAGAAAGTGGACCTGGAGACGGAGGGGGACGTCCCCGTCGTGGCTTCAGCGCTGAAGCCGTTTCTCAGGGATCTCCCCAAGGCTCTGATTCTGGACCACTCGGACATCGTCAACGCCTTCAAAGGAAGTGAAAACAAGGCTGAGCTGGAGAGTCCGGCGGCAGACCATCAGCTTCTGCTCAGACACTTTGTCCACTTCCTGGTCCAAGTGGCATCTTACAGTGACACCAACAAGATGACCCTTAAGACTCCCTGCAGGATTAAGTTACAGATTGAGCTGTGTGTCAGAGTGATTGACAGGGTGGAAattGGCAATACAGGTGTTATGCTGGCAGATGTGGGATACACAATCAGAGAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89492 lncRNA downstream 59212 23705566 ~ 23705866 (-) True G71583
TU89491 lncRNA downstream 59658 23705199 ~ 23705420 (-) True G71582
TU89467 lncRNA downstream 352094 23412616 ~ 23412984 (-) True G71561
TU89445 lncRNA downstream 780511 22984149 ~ 22984567 (-) True G71540
TU89444 lncRNA downstream 803008 22961869 ~ 22962070 (-) True G71539
TU89670 lncRNA upstream 1163584 25488226 ~ 25490651 (-) True G71723
TU89673 lncRNA upstream 1183955 25508597 ~ 25508870 (-) True G71726
TU89674 lncRNA upstream 1206296 25530938 ~ 25533180 (-) True G71727
TU89693 lncRNA upstream 1266176 25590818 ~ 25591551 (-) True G71740
TU89807 lncRNA upstream 1702893 26027535 ~ 26028500 (-) True G71835
AMCG00014633 mRNA downstream 160347 23603609 ~ 23604731 (-) True AMCG00014633
AMCG00014631 mRNA downstream 1432268 22320028 ~ 22332810 (-) True AMCG00014631
AMCG00014630 mRNA downstream 1520163 22225925 ~ 22244915 (-) True AMCG00014630
AMCG00014628 mRNA downstream 1639712 22119740 ~ 22125366 (-) True AMCG00014628
AMCG00014629 mRNA downstream 1651447 22112182 ~ 22113631 (-) True AMCG00014629
AMCG00014639 mRNA upstream 575449 24900091 ~ 24910282 (-) True AMCG00014639
AMCG00014640 mRNA upstream 589661 24914303 ~ 24927812 (-) True AMCG00014640
AMCG00014641 mRNA upstream 636304 24960946 ~ 24961689 (-) True AMCG00014641
AMCG00014642 mRNA upstream 679863 25004505 ~ 25073710 (-) True AMCG00014642
AMCG00014645 mRNA upstream 805696 25130338 ~ 25143368 (-) True AMCG00014645
TU87063 other downstream 12102585 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 12966931 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 14447911 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 15380854 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 15606488 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 4005097 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 5064648 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 7938525 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 8272820 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 8272820 32597462 ~ 32619149 (-) False G73127

Expression Profile