RNA id: AMCG00014902


Basic Information

Item Value
RNA id AMCG00014902
length 1683
RNA type mRNA
GC content 0.52
exon number 10
gene id AMCG00014902
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39138823 ~ 39176661 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGCCCCTGTGTGGCCCCAGTGCCCTGCAGCTGTGTGTGAGCCAGCAATATGTCCAGGCTCTCTGCAGCTCCTTTAAGAGCACAGACTGCAGCATTGGAGGGGAGGGGCTCAGCTACAACGCTTCACAGAAACTAAAATCTTACAACCTGCTGCAGCAGAGCCCAGGCCCTGACACGGGTAACAGAGGAGCGGGGCAGGAAGAGACCCGGGGCCTTATTGACCACAGTGTGGACTCTGAAGAGCTGCTCTGCACAGGTTTGAGCGAGATCCTTCAGGCTCAGCTGTGTAAGACTGAGGCAGAAGTGCAACAGAAGATCAAGGACAGGCTGAAGAAGGTGGAGGAGCTCAGATGGTCAGTGGAGCTCAGCAGAAGTCTCCCAGTCCTGTGCCCTCTTCCACACACCAAGGACTGGTATGCCATCTCTGTGAACTCTGACCTCTGTTTCGAGGCTGTCAGGAGAGCTGTGTCTCAGCTGGAGGAGGGTCTCAGGGAGGAACTGGAGAAGCTGCCAGAGATAAGTGAGCTCTTCTCTGTGCCTCTGCTCTTCACTGACAGGGACATGGCTGTGACTGAGGGCTTCCTTCTCATCGCCTGCCTGCTGCGAGGTGTCATTTGCAGAGAGACACATCCTGGTTTTTCAATCTCAATGCCTGCCAGTGTAGCAGCCCTGAGTGGCTCCTGTGTGCTGATTCCCTGTCAGTTTGAGGTTGCTGACAAATTCAAAGACAAGGTGAAGGATTTGAAAACAGCATTATGGAGAGAGGGTTCAGCAGAAGGACCCACTGTGTTGGAATCCAATGGACCTGGATCACAGGGGCCTGAGAAGATCATTGGGGACTTCAGAGCCAAGAACTGCACGACCATCCTGAACAATATTCAGAAAAGCGATAATTATCACTTCAGAATTGGGGAACCCATCAAATTCACCTATAGAACACCAGTTAAAATTGAAGTTACAGACAATCCTCCAAAACTAATGAAAGATGATCAAGTGAAGGAGAGGACCCCCATGAAATTAAGCTGCTCTGCTGCAGCCCCCTGTCCTACACTCCCCCCAGCCCTGACATGGACCCCCAGGATGAATGGGACTGTGGATCACCAGGAGGTAGAGAATCAGGATAAAACCAAATCTGTGTCTTCTGTTCTGACCTTCACTGCTTCACATCTCCACCATGGGCTGAACATCAGCTGCACTGCGCTCTATCCACTGCAACAGCTGAACCACAGCACAACGGCTGAAGCGACTGTGACTCTCAGTGTCCTGTGTGAGACATCTGCTCTTTTCATAATACCTAACATGCCAGAGATTGTGAACGCCTCACCGTGTATCAGGAACACAGCAGACATCACCTGCCAGTGTGAAAGCCATGGGCATCCCTCACCCAGCACTGAGTGGCTGCTCTCTGGACAAAGACTCAGCAGTGACTCTGTTGTCAGTGTCATTAGAAAAGAGCAGCTGGACAGCCGAGCCCTGAGGAGCACCCTCACTCTGGTGAAGACACTGGGGCAGACGGACACTATTGAGTGCCTGAGCAGGAACACTGCTGGATCTTCCAGACTCCTGTTTCAGATTCCTCCTTCAGGTCAAGAGGGTCCCTTCAGTACCTCAGGATTGCTGATTGGAGGTGCAGTTGGAGCTCTGCTAATGTCACTCTTGTGCTGCCTGATCCAGACCATTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92735 lncRNA downstream 96775 39002622 ~ 39042048 (-) True G74277
TU92693 lncRNA downstream 270897 38867561 ~ 38867926 (-) True G74239
TU92683 lncRNA downstream 301684 38836895 ~ 38837139 (-) True G74232
TU92675 lncRNA downstream 334938 38802916 ~ 38803885 (-) True G74224
TU92674 lncRNA downstream 350550 38787961 ~ 38788273 (-) True G74223
TU92771 lncRNA upstream 5705 39182366 ~ 39182634 (-) True G74307
TU92846 lncRNA upstream 55643 39232304 ~ 39238764 (-) True G74368
TU92855 lncRNA upstream 81869 39258530 ~ 39260360 (-) False G74375
TU92839 lncRNA upstream 117290 39293951 ~ 39295579 (-) False G74367
TU92844 lncRNA upstream 117290 39293951 ~ 39299385 (-) False G74367
AMCG00014897 mRNA downstream 302471 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014895 mRNA downstream 450762 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 509623 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 645869 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014889 mRNA downstream 714982 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014901 mRNA upstream 28386 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 86480 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 105493 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 201783 39378444 ~ 39379116 (-) False AMCG00014906
AMCG00014910 mRNA upstream 354665 39531326 ~ 39536843 (-) True AMCG00014910
TU92703 other downstream 218470 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 494285 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 647883 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 705948 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 725592 38412160 ~ 38413231 (-) True G74107
TU92854 other upstream 81401 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 461238 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 724809 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 758232 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 768069 39944730 ~ 39951070 (-) True G74591

Expression Profile