RNA id: TU92703


Basic Information

Item Value
RNA id TU92703
length 555
RNA type TUCP
GC content 0.45
exon number 2
gene id G74247
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38898095 ~ 38920353 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tcaaaaaagttatacattgatttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtatCTTtgtacaggtaacgagctgagattaggagcactttCTTAAAGGGActctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaggaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattattcgcaaatggaagaaacacaaaataactgtcagtctccctcggtctggggctccatgcgagatctcacctcgtggagtttcaatgatcatgagaatggtgaggaatcagcccagaactacacgggaggatcttgttaatgatctcaaggcagctgggaccatagtcaccaagaaaacaattggtaacacactacgccGTAAAGGACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92693 lncRNA downstream 30169 38867561 ~ 38867926 (-) True G74239
TU92683 lncRNA downstream 60956 38836895 ~ 38837139 (-) True G74232
TU92675 lncRNA downstream 94210 38802916 ~ 38803885 (-) True G74224
TU92674 lncRNA downstream 109822 38787961 ~ 38788273 (-) True G74223
TU92672 lncRNA downstream 121340 38775704 ~ 38776755 (-) True G74221
TU92735 lncRNA upstream 82269 39002622 ~ 39042048 (-) True G74277
TU92771 lncRNA upstream 262013 39182366 ~ 39182634 (-) True G74307
TU92846 lncRNA upstream 311951 39232304 ~ 39238764 (-) True G74368
TU92855 lncRNA upstream 338177 39258530 ~ 39260360 (-) False G74375
TU92839 lncRNA upstream 373598 39293951 ~ 39295579 (-) False G74367
AMCG00014897 mRNA downstream 61743 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014895 mRNA downstream 210034 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 268895 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 405141 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014889 mRNA downstream 474254 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014902 mRNA upstream 218470 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014901 mRNA upstream 284694 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 342788 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 361801 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 458091 39378444 ~ 39379116 (-) False AMCG00014906
TU92596 other downstream 253557 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 407155 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 465220 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 484864 38412160 ~ 38413231 (-) True G74107
TU92499 other downstream 547804 38343322 ~ 38350291 (-) False G74087
TU92854 other upstream 337709 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 717546 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 981117 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 1014540 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 1024377 39944730 ~ 39951070 (-) True G74591

Expression Profile