Fish Single-cell RNA Database

CELL TYPE: Brush border cells

Distribution of Brush border cells in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000014572	chpt1	4: 17707008 ~ 17725008 (-)
ENSDARG00000032639	cd36	4: 22658472 ~ 22671469 (-)
ENSDARG00000003615	slc26a3.2	4: 18804317 ~ 18823032 (+)
ENSDARG00000104839	mansc1	4: 69619 ~ 72011 (+)
ENSDARG00000039211	zgc:77439	7: 26297169 ~ 26308242 (-)
ENSDARG00000105187	gcshb	7: 67451108 ~ 67463021 (+)
ENSDARG00000035544	etnppl	7: 60079302 ~ 60092321 (+)
ENSDARG00000002986	gda	5: 25708369 ~ 25723079 (-)
ENSDARG00000012076	apoa1a	5: 37978501 ~ 37981521 (+)
ENSDARG00000013730	slc4a4a	5: 45746457 ~ 45877387 (-)
ENSDARG00000099111	zgc:175280	5: 67812062 ~ 67834257 (+)
ENSDARG00000061858	zgc:153968	3: 21225750 ~ 21230668 (+)
ENSDARG00000054588	cox6a2	3: 31039923 ~ 31042102 (+)
ENSDARG00000037874	cyp3c3	3: 40958870 ~ 40965596 (-)
ENSDARG00000058462	zgc:158846	6: 39336731 ~ 39344259 (-)
ENSDARG00000044528	slc15a1b	6: 12556427 ~ 12588044 (-)
ENSDARG00000006207	gpx1b	6: 42338309 ~ 42341219 (+)
ENSDARG00000038153	lgals2b	6: 603278 ~ 609887 (-)
ENSDARG00000013522	pck1	6: 60055168 ~ 60062097 (+)
ENSDARG00000005191	ahcy	6: 49926115 ~ 49966288 (+)
ENSDARG00000067848	nmrk2	2: 55982300 ~ 55990329 (+)
ENSDARG00000095362	si:ch211-77g15.32	2: 47986662 ~ 47988542 (-)
ENSDARG00000012194	scp2a	2: 6005199 ~ 6039757 (-)
ENSDARG00000025350	prdx2	1: 51721851 ~ 51729862 (+)
ENSDARG00000023151	ucp1	1: 53374454 ~ 53388914 (+)
ENSDARG00000001870	atp1a1a.4	1: 1689775 ~ 1706159 (+)
ENSDARG00000100792	zgc:154142	1: 50794669 ~ 50838160 (-)
ENSDARG00000017772	mdh1aa	1: 50968908 ~ 50990889 (+)
ENSDARG00000052712	suclg1	1: 43652480 ~ 43684584 (-)
ENSDARG00000006427	fabp2	1: 25848231 ~ 25851575 (+)
ENSDARG00000012903	slc34a2a	1: 14432434 ~ 14442902 (+)
ENSDARG00000103295	cyp3a65	1: 59338175 ~ 59348118 (-)
ENSDARG00000022261	pdzk1	9: 5862040 ~ 5892075 (+)
ENSDARG00000017882	rdh1	9: 48673093 ~ 48701035 (-)
ENSDARG00000019260	dhrs9	9: 48706038 ~ 48736388 (-)
ENSDARG00000040466	vil1	9: 44907768 ~ 44953664 (-)
ENSDARG00000042124	si:dkey-4e7.3	9: 7072504 ~ 7081557 (+)
ENSDARG00000070057	si:dkey-69o16.5	9: 11587629 ~ 11595736 (+)
ENSDARG00000100315	slc15a1a	9: 1137430 ~ 1162804 (+)
ENSDARG00000043457	gapdh	16: 17189839 ~ 17200120 (-)
ENSDARG00000095863	afp4	16: 45912647 ~ 45917683 (-)
ENSDARG00000029230	pnp4b	16: 36807924 ~ 36834633 (-)
ENSDARG00000040295	apoeb	16: 23960744 ~ 23963461 (+)
ENSDARG00000020866	apoa4b.2	16: 23947196 ~ 23948538 (+)
ENSDARG00000092170	apoc1	16: 23972126 ~ 23973721 (+)
ENSDARG00000040298	apoa4b.1	16: 23913943 ~ 23916263 (+)
ENSDARG00000056719	slc6a19b	16: 18974064 ~ 18998549 (+)
ENSDARG00000092155	apoc2	16: 23984179 ~ 23994642 (+)
ENSDARG00000044685	nr0b2a	16: 54875530 ~ 54880550 (+)
ENSDARG00000042010	pklr	16: 54450407 ~ 54455573 (-)
ENSDARG00000043257	ckbb	20: 20816747 ~ 20821789 (-)
ENSDARG00000022767	apobb.1	20: 31269778 ~ 31285980 (+)
ENSDARG00000029747	mep1a.1	20: 35473288 ~ 35481584 (+)
ENSDARG00000042953	cyp2n13	20: 25515259 ~ 25522911 (-)
ENSDARG00000041787	cx32.3	20: 40753518 ~ 40755614 (-)
ENSDARG00000041797	cx28.9	20: 40744754 ~ 40750953 (-)
ENSDARG00000095633	si:ch211-133l5.7	8: 20832584 ~ 20838342 (-)
ENSDARG00000059227	fabp1b.1	8: 999421 ~ 1006174 (+)
ENSDARG00000041540	sult1st2	8: 46513743 ~ 46525092 (-)
ENSDARG00000018361	sult1st3	8: 46559332 ~ 46581448 (-)
ENSDARG00000042112	dio1	8: 18039570 ~ 18042089 (-)
ENSDARG00000003902	ctsl.1	17: 27456804 ~ 27461321 (+)
ENSDARG00000096445	si:ch211-214p16.3	17: 25649939 ~ 25737452 (-)
ENSDARG00000104028	si:dkey-74k8.3	14: 21052504 ~ 21064199 (-)
ENSDARG00000053684	aldob	14: 21106444 ~ 21121199 (+)
ENSDARG00000092553	slc25a5	14: 32881625 ~ 32884138 (-)
ENSDARG00000068515	chs1	13: 285874 ~ 303137 (-)
ENSDARG00000015662	pla2g12b	13: 4671698 ~ 4683595 (+)
ENSDARG00000057064	enpep	13: 12543634 ~ 12581388 (-)
ENSDARG00000061375	sgpl1	13: 25725547 ~ 25750910 (-)
ENSDARG00000104347	rtn4b	13: 216320 ~ 226393 (-)
ENSDARG00000036239	gatm	18: 35725 ~ 46010 (-)
ENSDARG00000036237	slc27a2a	18: 62932 ~ 73844 (+)
ENSDARG00000101074	glud1b	12: 25845494 ~ 25881944 (+)
ENSDARG00000103785	sult2st2	12: 648334 ~ 656540 (-)
ENSDARG00000013721	g6pca.2	12: 6041575 ~ 6048286 (+)
ENSDARG00000012829	asah2	12: 6117682 ~ 6142673 (+)
ENSDARG00000002968	a1cf	12: 6160446 ~ 6177894 (-)
ENSDARG00000075931	acsl5	12: 31438579 ~ 31461412 (-)
ENSDARG00000079647	muc13b	12: 16106459 ~ 16122514 (+)
ENSDARG00000098724	rgrb	12: 48965049 ~ 48970299 (-)
ENSDARG00000037425	s100a10a	19: 8506178 ~ 8608414 (+)
ENSDARG00000036834	krt92	19: 5349656 ~ 5352199 (-)
ENSDARG00000003931	cndp2	19: 20801060 ~ 20823099 (+)
ENSDARG00000101160	apoa4a	19: 10845953 ~ 10850834 (+)
ENSDARG00000102004	apoea	19: 10855158 ~ 10859694 (+)
ENSDARG00000020850	eef1a1l1	19: 43119014 ~ 43137740 (+)
ENSDARG00000104172	diabloa	15: 14854666 ~ 14858189 (+)
ENSDARG00000025595	agmo	15: 34334722 ~ 34418525 (-)
ENSDARG00000037551	pm20d1.1	23: 18020928 ~ 18030399 (-)
ENSDARG00000100075	abcg2a	23: 45906137 ~ 45936357 (+)
ENSDARG00000039007	eno3	23: 44611864 ~ 44625579 (+)
ENSDARG00000003113	ada	23: 25946448 ~ 25976656 (-)
ENSDARG00000003219	bin2a	23: 33739215 ~ 33753361 (-)
ENSDARG00000055539	epdl2	21: 28513057 ~ 28523548 (-)
ENSDARG00000021149	cbr1l	21: 21633213 ~ 21641194 (-)
ENSDARG00000053853	slc13a2	21: 39100289 ~ 39118502 (+)
ENSDARG00000023820	faxdc2	21: 45839917 ~ 45852112 (+)
ENSDARG00000009612	chia.3	11: 24013769 ~ 24016813 (-)
ENSDARG00000016918	ace2	11: 29981678 ~ 29996357 (-)
ENSDARG00000100635	chia.1	11: 23993298 ~ 24000171 (+)
ENSDARG00000099185	chia.2	11: 24001993 ~ 24008739 (+)
ENSDARG00000061120	slc43a2b	10: 24371921 ~ 24391716 (-)
ENSDARG00000057035	stoml3b	10: 24641229 ~ 24648231 (-)
ENSDARG00000013871	slc5a1	10: 17135631 ~ 17159761 (-)
ENSDARG00000043729	plac8.1	10: 11382365 ~ 11385155 (-)
ENSDARG00000018846	dgat2	10: 32501961 ~ 32524771 (-)
ENSDARG00000019228	mogat2	10: 32534814 ~ 32610776 (-)
ENSDARG00000014556	serpinb1l3	24: 42148140 ~ 42157913 (+)
ENSDARG00000045414	elovl2	24: 8861272 ~ 8887825 (-)
ENSDARG00000093044	si:ch211-161h7.5	24: 20909922 ~ 20915050 (-)
ENSDARG00000089919	si:ch211-161h7.8	24: 20960216 ~ 20964379 (+)
ENSDARG00000061355	aoc1	24: 40001290 ~ 40009446 (-)
ENSDARG00000040747	tm4sf4	22: 38127467 ~ 38137908 (-)
ENSDARG00000053774	alpi.2	22: 38778649 ~ 38794610 (+)
ENSDARG00000000212	krt97	22: 11756040 ~ 11759106 (+)
ENSDARG00000068478	gpx4a	22: 17589608 ~ 17611742 (-)
ENSDARG00000103342	wu:fa56d06	KN149797.1: 55555 ~ 70688 (-)
ENSDARG00000099389	cdo1	KN149707.2: 4029 ~ 7435 (+)
--	akr1b1	--
--	apoa4b.3	--
--	atp5g3b	--
--	hrsp12	--
--	mtp	--
--	si:ch211-217g15.3	--
--	loc100536156	--
--	npc1l1	--
--	slc2a9l2	--
--	apoa1a.1	--
--	aqp8a.2.1	--
--	gamt.1	--
--	im:7150573	--
--	loc100147904	--
--	loc100330805	--
--	si:ch1073-340i21.1	--
--	si:ch211-107o10.3.1	--
--	si:ch211-77g15.32.1	--
--	wu:fb63c12	--
--	zgc:165502	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Brush border cells.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE150498 (wildtype, untreated)	Danio rerio	intestine	8	Brush border cells	baseline	6dpf, wildtype, untreated	ENSDARG00000103342 (wu:fa56d06)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, untreated)	Danio rerio	intestine	4	Brush border cells	disease	6dpf, nod2-/-, untreated	ENSDARG00000023151 (ucp1)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (wildtype, 1X DSS)	Danio rerio	intestine	2	Brush border cells	disease	6dpf, wildtype, 1X DSS	ENSDARG00000103342 (wu:fa56d06)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (wildtype, 2X DSS+BZA)	Danio rerio	intestine	3	Brush border cells	disease	6dpf, wildtype, 2X DSS+BZA	ENSDARG00000023151 (ucp1)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, 2X DSS)	Danio rerio	intestine	2	Brush border cells	disease	6dpf, nod2-/-, 2X DSS	ENSDARG00000103342 (wu:fa56d06)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, 2X DSS+BZA)	Danio rerio	intestine	3	Brush border cells	disease	6dpf, nod2-/-, 2X DSS+BZA	ENSDARG00000103342 (wu:fa56d06)	marker	DOI:10.1038/s41586-021-03484-5

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Brush border cells

Distribution of Brush border cells in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences