Fish Single-cell RNA Database

GENE ID: ENSDARG00000059798

Symbol	Location	Gene type	Genome version	Species
kcnq1.1	7: 48555400 ~ 48658172 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000059798 (kcnq1.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000008398	cacna1c	4: 20318127 ~ 20474972 (+)
ENSDARG00000103057	zfhx3	7: 68214935 ~ 68373495 (-)
ENSDARG00000052271	slc22a18	7: 39537790 ~ 39552314 (-)
ENSDARG00000059798	kcnq1.1	7: 48555400 ~ 48658172 (+)
ENSDARG00000001803	kcnh6a	3: 31728871 ~ 31784082 (-)
ENSDARG00000078725	nos1apa	6: 35099897 ~ 35106425 (-)
ENSDARG00000029881	kcnh2a	2: 24080694 ~ 24168670 (+)
ENSDARG00000003421	igf2bp2a	9: 12468500 ~ 12575776 (-)
ENSDARG00000019753	kcnn3	16: 23598908 ~ 23719649 (+)
ENSDARG00000006094	igf2r	20: 42563618 ~ 42660656 (+)
ENSDARG00000034187	calm1b	20: 16743056 ~ 16775258 (+)
ENSDARG00000021811	calm1a	17: 26713111 ~ 26721007 (-)
ENSDARG00000061685	hcn4	18: 1004814 ~ 1143998 (-)
ENSDARG00000019418	kcnj2a	12: 36259018 ~ 36260532 (-)
ENSDARG00000015050	calm3a	12: 24952902 ~ 24958792 (+)
ENSDARG00000079610	akap9	19: 551963 ~ 586300 (+)
ENSDARG00000068257	kcne4	15: 43093044 ~ 43100399 (+)
ENSDARG00000099203	atp1b2a	23: 44732863 ~ 44763861 (+)
ENSDARG00000070351	hoxc11a	23: 36074798 ~ 36078132 (+)
ENSDARG00000060006	nedd4l	21: 10890258 ~ 11054876 (-)
ENSDARG00000074057	calm3b	21: 26726936 ~ 26732085 (+)
ENSDARG00000086493	mtnr1bb	10: 25035459 ~ 25069207 (-)
ENSDARG00000102312	scn5lab	24: 40905100 ~ 41143256 (+)
ENSDARG00000075846	kcnip2	22: 34985533 ~ 35006554 (-)
ENSDARG00000038847	gins3	25: 13399967 ~ 13408760 (-)
ENSDARG00000051880	kcnj11	25: 22853718 ~ 22854863 (+)
ENSDARG00000042874	phlda2	25: 23524796 ~ 23526086 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	Horizontal cells (cluster: 11)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000059798

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences