Fish Single-cell RNA Database

GENE ID: ENSDARG00000077986

Symbol	Location	Gene type	Genome version	Species
NA	7: 19882066 ~ 19900002 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000077986 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000077986	NA	7: 19882066 ~ 19900002 (+)
ENSDARG00000078908	fbxo41	1: 41666611 ~ 41755499 (+)
ENSDARG00000021869	rcan2	20: 39055432 ~ 39188476 (-)
ENSDARG00000068367	nfkbie	20: 51274297 ~ 51307815 (-)
ENSDARG00000062823	pi4kab	8: 1741938 ~ 1838315 (-)
ENSDARG00000032623	rcan3	17: 26879725 ~ 26926577 (-)
ENSDARG00000077912	bcorl1	14: 41406321 ~ 41439491 (+)
ENSDARG00000069329	drgx	13: 30912117 ~ 30920265 (+)
ENSDARG00000089486	cplx3b	18: 5677508 ~ 5692292 (-)
ENSDARG00000042620	gstr	19: 770300 ~ 776076 (+)
ENSDARG00000028628	gdap1l1	23: 35759843 ~ 35782365 (+)
ENSDARG00000076310	NA	23: 45584223 ~ 45606426 (+)
ENSDARG00000014324	sh2d5	11: 37638873 ~ 37651879 (+)
ENSDARG00000062508	cplx3a	25: 20577890 ~ 20581480 (-)
ENSDARG00000099196	cplx3a	KN149995.1: 4573 ~ 7426 (+)
--	olfml1	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000077986

EXPRESSION

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