Fish Single-cell RNA Database

GENE ID: ENSDARG00000035602

Symbol	Location	Gene type	Genome version	Species
dao.1	5: 20188438 ~ 20195350 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000035602 (dao.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000096045	si:ch73-263o4.4	4: 28356606 ~ 28373257 (+)
ENSDARG00000096207	si:ch73-263o4.3	4: 28355058 ~ 28360129 (+)
ENSDARG00000035602	dao.1	5: 20188438 ~ 20195350 (-)
ENSDARG00000005643	gcat	3: 25990052 ~ 25998243 (+)
ENSDARG00000052099	agxta	6: 27112884 ~ 27123327 (-)
ENSDARG00000018478	agxtb	2: 22676743 ~ 22688651 (-)
ENSDARG00000019986	grhprb	1: 19835803 ~ 19845539 (-)
ENSDARG00000027992	hao2	9: 21146862 ~ 21164617 (+)
ENSDARG00000038643	alas2	8: 21353878 ~ 21369028 (+)
ENSDARG00000024160	hao1	17: 4030493 ~ 4063581 (+)
ENSDARG00000022832	bnip4	17: 20231801 ~ 20236309 (-)
ENSDARG00000006840	gnmt	17: 48920799 ~ 48936123 (-)
ENSDARG00000068264	grhpra	14: 44777478 ~ 44790817 (-)
ENSDARG00000036239	gatm	18: 35725 ~ 46010 (-)
ENSDARG00000076225	tha1	12: 34378733 ~ 34397139 (+)
ENSDARG00000055591	pipox	15: 24150090 ~ 24178893 (-)
ENSDARG00000008788	camk1gb	23: 39558508 ~ 39597901 (+)
ENSDARG00000029905	phyhd1	21: 4508959 ~ 4525080 (+)
ENSDARG00000003169	magi1b	11: 18873113 ~ 19091767 (+)
ENSDARG00000007024	uox	11: 8160894 ~ 8168011 (-)
ENSDARG00000021059	alas1	11: 260763 ~ 270210 (-)
ENSDARG00000058102	sardh	10: 10386435 ~ 10564968 (+)
ENSDARG00000018944	hoga1	22: 34710036 ~ 34732882 (+)
ENSDARG00000040427	acot19	25: 31714335 ~ 31739309 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000035602

EXPRESSION

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