Fish Single-cell RNA Database

GENE ID: ENSDARG00000013649

Symbol	Location	Gene type	Genome version	Species
casr	5: 67768162 ~ 67783593 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000013649 (casr), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000077654	grm8a	4: 3478049 ~ 3745093 (+)
ENSDARG00000031737	pthlha	4: 612363 ~ 626550 (+)
ENSDARG00000091961	pth1b	7: 66136409 ~ 66137065 (-)
ENSDARG00000068246	plcb3	7: 60255852 ~ 60351876 (-)
ENSDARG00000013649	casr	5: 67768162 ~ 67783593 (-)
ENSDARG00000077080	gprc5ba	3: 62367307 ~ 62380146 (-)
ENSDARG00000001835	nalcn	9: 31589425 ~ 31747106 (-)
ENSDARG00000056704	NA	9: 28778649 ~ 28867908 (-)
ENSDARG00000005371	gprc6a	16: 32152612 ~ 32159033 (+)
ENSDARG00000014496	trpv6	16: 12294284 ~ 12319822 (-)
ENSDARG00000086265	bsnd	20: 7243879 ~ 7251770 (+)
ENSDARG00000007582	olfcb1	20: 98179 ~ 106012 (+)
ENSDARG00000010425	scara5	20: 1354695 ~ 1383916 (-)
ENSDARG00000026796	grm1a	20: 32047385 ~ 32112818 (-)
ENSDARG00000003303	stc1	8: 50322769 ~ 50346246 (-)
ENSDARG00000053135	tas1r2.2	8: 46587593 ~ 46597751 (+)
ENSDARG00000079880	tas2r200.1	8: 30784020 ~ 30784982 (+)
ENSDARG00000074066	tas2r200.2	8: 30780985 ~ 30782089 (+)
ENSDARG00000090381	NA	17: 2348540 ~ 2386569 (-)
ENSDARG00000102491	gpr142	12: 36054721 ~ 36070473 (-)
ENSDARG00000061042	gabbr2	19: 34311374 ~ 34679738 (+)
ENSDARG00000016667	gabbr1b	19: 27040533 ~ 27261102 (-)
ENSDARG00000026967	ap2s1	15: 8767650 ~ 8799977 (+)
ENSDARG00000018967	gabbr1a	15: 34717514 ~ 34845414 (-)
ENSDARG00000102067	grm5b	15: 43656241 ~ 43768776 (-)
ENSDARG00000056739	tas1r1	23: 21424747 ~ 21440054 (+)
ENSDARG00000074201	flna	23: 19759128 ~ 19809027 (+)
ENSDARG00000022560	clcnk	23: 24272421 ~ 24291927 (+)
ENSDARG00000025671	grm6b	11: 25634041 ~ 25679721 (+)
ENSDARG00000006341	tas1r3	11: 40731602 ~ 40742507 (-)
ENSDARG00000058476	stc1l	10: 42677891 ~ 42685512 (-)
ENSDARG00000004445	grm5a	10: 25219728 ~ 25272236 (+)
ENSDARG00000045413	gcm2	24: 8827603 ~ 8831912 (-)
ENSDARG00000077134	gpr158a	24: 6395385 ~ 6501211 (-)
ENSDARG00000093738	pth1a	25: 17860798 ~ 17861696 (+)
--	plcb4	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	Epidermal cells (cluster: 12)	potential marker	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000013649

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences