Fish Single-cell RNA Database

GENE ID: ENSDARG00000062947

Symbol	Location	Gene type	Genome version	Species
amn	3: 56876280 ~ 56877918 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000062947 (amn), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000032639	cd36	4: 22658472 ~ 22671469 (-)
ENSDARG00000063030	mesd	7: 11376325 ~ 11384279 (-)
ENSDARG00000036481	tcn2	5: 26795465 ~ 26806100 (+)
ENSDARG00000031761	dab2	5: 32323775 ~ 32338872 (-)
ENSDARG00000091996	tcnbb	5: 30614532 ~ 30615901 (-)
ENSDARG00000068088	tcnba	5: 30617915 ~ 30620625 (-)
ENSDARG00000061047	abcg4a	5: 30624183 ~ 30672482 (+)
ENSDARG00000062947	amn	3: 56876280 ~ 56877918 (+)
ENSDARG00000075926	igfn1.2	6: 46743246 ~ 46768040 (-)
ENSDARG00000086028	igfn1.4	6: 46771654 ~ 46790042 (-)
ENSDARG00000097613	igfn1.3	6: 46843592 ~ 46875310 (-)
ENSDARG00000100792	zgc:154142	1: 50794669 ~ 50838160 (-)
ENSDARG00000062009	gpr18	9: 31089649 ~ 31090593 (-)
ENSDARG00000102506	lrp2a	9: 48415043 ~ 48672254 (+)
ENSDARG00000060243	enox1	9: 18310228 ~ 18568927 (-)
ENSDARG00000102888	gpr39	9: 56422311 ~ 56426047 (+)
ENSDARG00000074540	gpr63	20: 405811 ~ 411135 (+)
ENSDARG00000062874	hcar1-3	13: 8987957 ~ 8994070 (+)
ENSDARG00000090764	bcas3	15: 26940569 ~ 27354759 (+)
ENSDARG00000078068	abcg4b	15: 23487730 ~ 23508214 (-)
ENSDARG00000087814	mfrp	15: 464229 ~ 477223 (-)
ENSDARG00000079423	npbwr2a	23: 30827959 ~ 30845859 (+)
ENSDARG00000091127	klf15	23: 35187683 ~ 35195908 (-)
ENSDARG00000092916	mlnl	21: 11969603 ~ 11981523 (+)
ENSDARG00000094386	adgrg4b	10: 26634472 ~ 26652593 (+)
ENSDARG00000087013	cubn	24: 32035759 ~ 32150276 (-)
ENSDARG00000017444	hal	25: 7954140 ~ 7974494 (-)
ENSDARG00000070478	amn1	25: 28893615 ~ 28903894 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000062947

EXPRESSION

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