Fish Single-cell RNA Database

GENE ID: ENSDARG00000001882

Symbol	Location	Gene type	Genome version	Species
kbtbd12	6: 40715637 ~ 40722480 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000001882 (kbtbd12), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000105343	klhl33	7: 4278839 ~ 4287996 (+)
ENSDARG00000105443	si:ch211-63p21.8	7: 4299907 ~ 4315859 (-)
ENSDARG00000097704	ccdc36	6: 40714811 ~ 40717048 (+)
ENSDARG00000001882	kbtbd12	6: 40715637 ~ 40722480 (-)
ENSDARG00000026178	ube3d	16: 4770266 ~ 4796565 (+)
ENSDARG00000039754	xpc	8: 26007308 ~ 26032245 (+)
ENSDARG00000038235	pkdccb	17: 31151215 ~ 31164219 (-)
ENSDARG00000035161	pkdcca	13: 3109064 ~ 3155244 (-)
ENSDARG00000078185	pacs2	13: 36446187 ~ 36525982 (-)
ENSDARG00000016427	fignl1	13: 15933168 ~ 15943904 (+)
ENSDARG00000076495	vwc2	13: 16150654 ~ 16191674 (-)
ENSDARG00000061622	kcng3	12: 25209369 ~ 25217217 (-)
ENSDARG00000016463	trappc6b	23: 32021803 ~ 32027198 (+)
ENSDARG00000090787	klhdc8b	23: 19249968 ~ 19434199 (-)
ENSDARG00000004132	usp19	23: 20145300 ~ 20177527 (-)
ENSDARG00000061640	sipa1l2	11: 31323746 ~ 31473982 (+)
ENSDARG00000071457	crp6	24: 38130604 ~ 38131381 (-)
ENSDARG00000071456	crp7	24: 38137473 ~ 38192003 (-)
ENSDARG00000043066	nog2	24: 38814734 ~ 38816725 (-)
ENSDARG00000045257	decr2	24: 37709191 ~ 37721739 (+)
ENSDARG00000016490	rab11fip3	24: 37722048 ~ 37794593 (+)
ENSDARG00000045273	tmem204	24: 37854002 ~ 37877978 (-)
ENSDARG00000030367	metrn	24: 37941618 ~ 37955993 (-)
ENSDARG00000087663	si:ch211-248l17.3	24: 37999090 ~ 38012593 (-)
ENSDARG00000086985	klc4	22: 38484447 ~ 38516940 (-)
ENSDARG00000032516	rrp36	22: 15343953 ~ 15352546 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	Skeletal muscle cells (cluster: 17)	potential marker	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Skeletal muscle cells (cluster: 38)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000001882

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences