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| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| CR855337.1 | 2: 35482156 ~ 35496918 (+) | lincRNA | GRCz11 | Danio rerio |
: marker.| Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
|---|---|---|---|---|---|---|---|
| GSE151354 (wild type) | cartilage | baseline | 21dpf, wild type |
Articular chondrocyte (cluster: 4) |
potential marker |
NA |
|
| GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells |
Endothelium (cluster: 8) |
potential marker |
NA |
|
| GSE161712 (M. marinum) | granulomas | disease | adult, infected with bacteria of M. marinum |
Inflammatory macrophages (cluster: 10) |
potential marker |
NA |
|
| GSE137784 (HCC, CreLox) | liver | disease | 6mpf, male, isolated from the zebrafish without HCC |
Immune cells (cluster: 4) |
potential marker |
NA |
|
| GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment | ||||
| GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment |
Amacrine cells (cluster: 10) Amacrine cells (cluster: 10) |
potential marker potential marker |
NA NA |
|
| GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells |
Smooth muscle cells (cluster: 11) Epidermal cells (cluster: 14) |
potential marker potential marker |
NA NA |
|
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- |
Neutrophils (cluster: 6) |
potential marker |
NA |
|
| GSE151354 (nkx3.2 mutant) | cartilage | growth | 21dpf, nkx3.2 mutant | ||||
| GSE144944 (fgfr3 +|+) | cranial vault | baseline | 1mpf, fgfr3 +/+ | ||||
| GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | ||||
| GSE158849 (labeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (labeled) | ||||
| GSE158849 (unlabeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (unlabeled) | ||||
| GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | ||||
| GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos | ||||
| GSE137784 (HCC, HepABC) | liver | disease | 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC | ||||
| GSE137784 (no HCC) | liver | baseline | 6mpf, male, isolated from the CreLox zebrafish with HCC | ||||
| GSE148591 (6mpf) | pituitary | baseline | 6mpf, male, Sox17:CreERT2 | ||||
| GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis | ||||
| GSE175929 (5mpf) | retina | baseline | 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg | ||||
| GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment | ||||
| GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment | ||||
| GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | ||||
| GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | ||||
| GSE158099 (WT) | whole body | baseline | 6dpf, cd41:GFPlow-WT | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 6dpf, cd41:GFPlow-runx1-/- | ||||
| GSE158099 (WT) | whole body | baseline | 10dpf, cd41:GFPlow-WT | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 10dpf, cd41:GFPlow-runx1-/- | ||||
| GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- |