Fish Single-cell RNA Database

GENE ID: ENSDARG00000069293

Symbol	Location	Gene type	Genome version	Species
ahsg2	2: 10134345 ~ 10141741 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000069293 (ahsg2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045516	itih2	4: 25187912 ~ 25215968 (-)
ENSDARG00000018149	slc38a4	4: 1516716 ~ 1566572 (+)
ENSDARG00000036041	f2	7: 38750871 ~ 38760158 (+)
ENSDARG00000068731	rxfp2l	5: 35875085 ~ 35953472 (-)
ENSDARG00000012076	apoa1a	5: 37978501 ~ 37981521 (+)
ENSDARG00000089310	gc	5: 45677781 ~ 45725008 (+)
ENSDARG00000035682	FP102018.1	5: 37517800 ~ 37585469 (+)
ENSDARG00000038258	proca	2: 5456541 ~ 5475910 (-)
ENSDARG00000093079	proca	2: 5457388 ~ 5475921 (-)
ENSDARG00000069293	ahsg2	2: 10134345 ~ 10141741 (+)
ENSDARG00000016771	tfa	2: 16780643 ~ 16794710 (+)
ENSDARG00000039517	c8b	2: 1478225 ~ 1518360 (-)
ENSDARG00000076900	prozb	1: 144284 ~ 151998 (+)
ENSDARG00000020741	fga	1: 10063501 ~ 10071539 (-)
ENSDARG00000095590	spp2	1: 29743442 ~ 29747702 (-)
ENSDARG00000037144	cpb2	1: 29759678 ~ 29764060 (+)
ENSDARG00000037281	fgg	1: 25669799 ~ 25679383 (-)
ENSDARG00000051912	hpxb	16: 2394193 ~ 2414063 (-)
ENSDARG00000038439	fabp10a	16: 52512025 ~ 52516915 (+)
ENSDARG00000037191	ttr	20: 6142433 ~ 6157942 (+)
ENSDARG00000042780	apoba	17: 30704068 ~ 30727966 (+)
ENSDARG00000057498	habp2	12: 31713239 ~ 31720066 (+)
ENSDARG00000055036	itih3a	11: 3614326 ~ 3629216 (-)
ENSDARG00000004296	ambp	10: 10801564 ~ 10824286 (+)
ENSDARG00000042684	serpinc1	22: 16022211 ~ 16028191 (+)
ENSDARG00000053973	fetub	22: 37888249 ~ 37900135 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Hepatocytes (cluster: 20)	potential marker	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	Hepatocytes (cluster: 9)	potential marker	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	Hepatocytes (cluster: 9)	potential marker	NA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	Hepatocytes (cluster: 5)	potential marker	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	Hepatocytes (cluster: 1)	potential marker	NA
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000069293

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences