Fish Single-cell RNA Database

GENE ID: ENSDARG00000086859

Symbol	Location	Gene type	Genome version	Species
qdprb2	1: 24382651 ~ 24385979 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000086859 (qdprb2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000076476	zgc:173770	4: 77132096 ~ 77135076 (-)
ENSDARG00000038384	th2	4: 17380578 ~ 17391091 (-)
ENSDARG00000020143	pah	4: 17391680 ~ 17409533 (-)
ENSDARG00000036082	tph1b	7: 33106332 ~ 33114884 (-)
ENSDARG00000079034	zpax4	7: 20577694 ~ 20582921 (-)
ENSDARG00000059459	NA	5: 68817034 ~ 68826177 (-)
ENSDARG00000102892	h1m	5: 68326858 ~ 68333081 (-)
ENSDARG00000005643	gcat	3: 25990052 ~ 25998243 (+)
ENSDARG00000039828	zp3b	2: 6253246 ~ 6258796 (+)
ENSDARG00000038720	zp3f.1	2: 38282647 ~ 38284749 (-)
ENSDARG00000086859	qdprb2	1: 24382651 ~ 24385979 (+)
ENSDARG00000090822	zgc:171517	1: 24376394 ~ 24380533 (+)
ENSDARG00000092090	si:ch211-125e6.12	9: 33216945 ~ 33218269 (+)
ENSDARG00000034989	retsatl	9: 44994214 ~ 44998722 (+)
ENSDARG00000075264	NA	9: 23859317 ~ 23885220 (-)
ENSDARG00000042129	zp3a.1	20: 33991801 ~ 33993698 (+)
ENSDARG00000042130	zp3a.2	20: 33987465 ~ 33989427 (+)
ENSDARG00000069251	zpax1	20: 43737022 ~ 43743700 (-)
ENSDARG00000019706	zar1	20: 23423814 ~ 23426339 (-)
ENSDARG00000105346	zp2.2	20: 54290356 ~ 54292173 (+)
ENSDARG00000089966	si:zfos-1505d6.3	20: 54299419 ~ 54301276 (+)
ENSDARG00000069411	cx34.5	20: 40757141 ~ 40760217 (-)
ENSDARG00000058553	sprb	8: 1065458 ~ 1070636 (+)
ENSDARG00000095867	si:ch73-132k15.2	8: 50134007 ~ 50135528 (-)
ENSDARG00000059252	zpcx	17: 25328351 ~ 25331447 (-)
ENSDARG00000040492	mthfd1b	17: 49354343 ~ 49412313 (-)
ENSDARG00000115457	zp3.2	17: 2587132 ~ 2590222 (-)
ENSDARG00000098588	gchfr	17: 1063988 ~ 1069194 (+)
ENSDARG00000031981	pcbd1	13: 25720969 ~ 25726534 (+)
ENSDARG00000057239	tph2	18: 16989764 ~ 17001056 (-)
ENSDARG00000087363	si:dkeyp-46h3.6	19: 27561664 ~ 27564458 (-)
ENSDARG00000092887	si:dkeyp-46h3.3	19: 27577099 ~ 27579835 (-)
ENSDARG00000006580	cldnd	21: 25777425 ~ 25778201 (+)
ENSDARG00000059046	psmd5	21: 5368130 ~ 5393125 (-)
ENSDARG00000094392	si:dkey-229d11.5	21: 43644573 ~ 43666481 (-)
ENSDARG00000077741	zgc:175135	11: 18037729 ~ 18039583 (+)
ENSDARG00000068465	zgc:136254	10: 8045364 ~ 8046764 (-)
ENSDARG00000055973	zar1l	10: 33999869 ~ 34002185 (-)
ENSDARG00000071583	gtf3ab	24: 21640635 ~ 21642858 (+)
ENSDARG00000095281	zgc:152652	24: 9981933 ~ 9991286 (-)
ENSDARG00000092924	zgc:171474	24: 10010630 ~ 10014624 (-)
ENSDARG00000086221	si:ch211-226h8.4	22: 25184459 ~ 25185570 (+)
ENSDARG00000088923	si:ch211-12h2.8	22: 25611415 ~ 25612680 (-)
ENSDARG00000096097	si:dkeyp-98a7.4	22: 25704430 ~ 25705660 (+)
ENSDARG00000107226	si:dkeyp-98a7.3	22: 25693297 ~ 25694563 (+)
ENSDARG00000094674	si:dkeyp-98a7.8	22: 25720725 ~ 25721994 (+)
ENSDARG00000116290	si:ch211-250e5.16	22: 25753972 ~ 25756668 (+)
ENSDARG00000029432	tph1a	25: 8139220 ~ 8160030 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000086859

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences