Fish Single-cell RNA Database

GENE ID: ENSDARG00000075285

Symbol	Location	Gene type	Genome version	Species
NA	9: 29040386 ~ 29058515 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000075285 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000017661	braf	4: 12074776 ~ 12102036 (-)
ENSDARG00000035535	rasa1a	5: 47862636 ~ 47967526 (+)
ENSDARG00000054533	araf	5: 26856253 ~ 26869392 (+)
ENSDARG00000002816	rasgrf2b	5: 51443009 ~ 51581775 (+)
ENSDARG00000075285	NA	9: 29040386 ~ 29058515 (+)
ENSDARG00000074307	rapgef5b	16: 19029297 ~ 19151800 (+)
ENSDARG00000042409	NA	8: 30949968 ~ 30979494 (-)
ENSDARG00000005989	rgl1	8: 19283143 ~ 19342111 (-)
ENSDARG00000075758	ywhabb	8: 45418985 ~ 45430942 (-)
ENSDARG00000077864	rasgrp3	17: 23146976 ~ 23201215 (+)
ENSDARG00000005482	rapgef2	14: 47779846 ~ 48033073 (-)
ENSDARG00000060506	sos2	13: 36638955 ~ 36663358 (-)
ENSDARG00000061796	rasgrp4	18: 35742838 ~ 35802483 (+)
ENSDARG00000073824	NA	18: 26337869 ~ 26418637 (+)
ENSDARG00000078775	NA	18: 41097406 ~ 41164358 (-)
ENSDARG00000075271	rapgef5a	19: 2726819 ~ 2753877 (+)
ENSDARG00000012982	nf1a	15: 30861647 ~ 30984804 (-)
ENSDARG00000096415	raf1a	23: 4709607 ~ 4747277 (+)
ENSDARG00000030547	rnd1a	23: 17800717 ~ 17815253 (+)
ENSDARG00000062328	rasgrp2	21: 28415888 ~ 28439596 (-)
ENSDARG00000010945	rapgef6	21: 45041684 ~ 45086170 (-)
ENSDARG00000070601	NA	11: 21278687 ~ 21363834 (-)
ENSDARG00000059406	raf1b	11: 506465 ~ 540252 (+)
ENSDARG00000004184	nf1b	10: 37268854 ~ 37394957 (+)
ENSDARG00000098405	map3k1	10: 5954787 ~ 6004863 (+)
ENSDARG00000073665	rasa1b	10: 43406796 ~ 43450588 (+)
ENSDARG00000044044	rassf2b	10: 20641001 ~ 20650302 (-)
ENSDARG00000000804	rassf6	10: 13209580 ~ 13236012 (+)
ENSDARG00000075054	rasgrf2a	10: 3049636 ~ 3106762 (+)
ENSDARG00000040853	shoc2	22: 29596646 ~ 29640181 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	Endothelium (cluster: 6)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA641144 (P_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (P_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo primary tumors
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (D_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro individual culture
PRJNA641144 (D_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture
PRJNA641144 (C_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro co-culture

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000075285

MARKER

EXPRESSION

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