Fish Single-cell RNA Database

GENE ID: ENSDARG00000015734

Symbol	Location	Gene type	Genome version	Species
aicda	16: 12660477 ~ 12665652 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000015734 (aicda), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000016979	pmpcb	4: 1761029 ~ 1771308 (+)
ENSDARG00000007745	uqcrfs1	7: 45400716 ~ 45406089 (+)
ENSDARG00000046127	tk2	7: 44599313 ~ 44605056 (-)
ENSDARG00000062646	tet3	5: 14306475 ~ 14373662 (-)
ENSDARG00000094922	ungb	5: 31944270 ~ 31952788 (+)
ENSDARG00000042527	unga	5: 67351219 ~ 67365750 (-)
ENSDARG00000097543	cbx6b	3: 24458204 ~ 24464794 (+)
ENSDARG00000014794	uqcrc2a	3: 58167288 ~ 58185030 (+)
ENSDARG00000035952	cdr2a	3: 58430678 ~ 58455289 (-)
ENSDARG00000070864	bcl6aa	6: 28216487 ~ 28222592 (-)
ENSDARG00000104571	gadd45ab	6: 23931236 ~ 23939154 (+)
ENSDARG00000022213	uck2b	2: 6051916 ~ 6065416 (-)
ENSDARG00000036833	upp2	9: 16097812 ~ 16109001 (-)
ENSDARG00000012945	tnfsf13b	9: 5325015 ~ 5337923 (-)
ENSDARG00000037861	slc2a3b	16: 12474861 ~ 12496632 (-)
ENSDARG00000015734	aicda	16: 12660477 ~ 12665652 (+)
ENSDARG00000002445	prdm1a	16: 7430998 ~ 7443388 (-)
ENSDARG00000040869	upp1	16: 16210208 ~ 16212615 (-)
ENSDARG00000006074	uck2a	8: 21114338 ~ 21133119 (+)
ENSDARG00000075230	tet1	13: 18202703 ~ 18295928 (+)
ENSDARG00000040917	cbfb	18: 22994113 ~ 23072665 (+)
ENSDARG00000071691	uqcrc2b	12: 10424676 ~ 10441661 (-)
ENSDARG00000087181	cbx7b	12: 18916285 ~ 18922976 (+)
ENSDARG00000002968	a1cf	12: 6160446 ~ 6177894 (-)
ENSDARG00000013295	slc2a3a	19: 9685165 ~ 9712530 (-)
ENSDARG00000022218	uck1	21: 4227260 ~ 4244514 (-)
ENSDARG00000102245	tk1	11: 45153104 ~ 45158056 (+)
ENSDARG00000022970	tm9sf1	24: 11887885 ~ 11908115 (-)
ENSDARG00000071051	cbx6a	22: 29075042 ~ 29083114 (-)
ENSDARG00000053375	nptxrb	22: 25025136 ~ 25033105 (-)
ENSDARG00000052121	rag2	25: 9010425 ~ 9013963 (-)
ENSDARG00000086450	tdg.2	25: 18953575 ~ 18965502 (+)
ENSDARG00000013004	tdg.1	25: 18964782 ~ 18978083 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000015734

EXPRESSION

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