Fish Single-cell RNA Database

GENE ID: ENSDARG00000004561

Symbol	Location	Gene type	Genome version	Species
prkcg	16: 13020776 ~ 13109749 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000004561 (prkcg), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000087413	bean1	7: 44484853 ~ 44589233 (+)
ENSDARG00000036252	rras2	7: 27834130 ~ 27887883 (+)
ENSDARG00000053956	sptbn2	5: 37649206 ~ 37709139 (+)
ENSDARG00000035152	ap2b1	5: 61657010 ~ 61724082 (+)
ENSDARG00000071152	pick1	3: 3610140 ~ 3634849 (+)
ENSDARG00000060095	kcnb1	6: 46507609 ~ 46565466 (-)
ENSDARG00000002790	ap2m1a	2: 9789811 ~ 9818711 (-)
ENSDARG00000040982	fgf14	9: 31838044 ~ 31915423 (-)
ENSDARG00000004561	prkcg	16: 13020776 ~ 13109749 (-)
ENSDARG00000057736	ano10a	16: 7985886 ~ 8041348 (+)
ENSDARG00000020123	coq8aa	20: 38458084 ~ 38519126 (+)
ENSDARG00000056101	kcnd3	8: 28065803 ~ 28232817 (+)
ENSDARG00000032426	coq8ab	17: 6467398 ~ 6487813 (+)
ENSDARG00000005670	ttbk2a	17: 45216084 ~ 45254585 (-)
ENSDARG00000021352	gria1a	14: 34125855 ~ 34276574 (-)
ENSDARG00000010934	syt14a	13: 31844011 ~ 31888487 (-)
ENSDARG00000060885	znf592	18: 26800061 ~ 26811959 (-)
ENSDARG00000087921	plce1	12: 5251647 ~ 5398578 (+)
ENSDARG00000026967	ap2s1	15: 8767650 ~ 8799977 (+)
ENSDARG00000087798	pdyn	23: 41799748 ~ 41802335 (+)
ENSDARG00000008142	stxbp3	23: 1661743 ~ 1698431 (+)
ENSDARG00000074149	itpr1b	11: 35777329 ~ 36020005 (-)
ENSDARG00000027618	grip2b	22: 31207226 ~ 31466591 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000004561

EXPRESSION

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