Fish Single-cell RNA Database

GENE ID: ENSDARG00000027807

Symbol	Location	Gene type	Genome version	Species
frk	20: 441942 ~ 463786 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000027807 (frk), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000068830	zgc:172139	4: 74970357 ~ 74998614 (-)
ENSDARG00000088167	si:ch211-112g6.4	7: 29293452 ~ 29298477 (+)
ENSDARG00000095348	sh2d1aa	5: 21288227 ~ 21294105 (+)
ENSDARG00000094764	fyba	5: 8616667 ~ 8636168 (-)
ENSDARG00000024818	rilpl2	5: 69795204 ~ 69804433 (-)
ENSDARG00000098312	scarb2a	5: 52844681 ~ 52862805 (+)
ENSDARG00000092810	stap2a	2: 49522178 ~ 49569304 (+)
ENSDARG00000094408	si:ch1073-110a20.1	1: 59140583 ~ 59141838 (-)
ENSDARG00000058943	cdcp1a	16: 2847565 ~ 2870522 (-)
ENSDARG00000041947	styk1b	16: 31965340 ~ 31976269 (-)
ENSDARG00000027807	frk	20: 441942 ~ 463786 (-)
ENSDARG00000043593	rapgef1a	8: 11779547 ~ 11835607 (-)
ENSDARG00000043281	stap2b	8: 18650414 ~ 18667693 (-)
ENSDARG00000062248	ptpn21	17: 2606697 ~ 2690083 (-)
ENSDARG00000069469	khdrbs2	13: 23282549 ~ 23388134 (+)
ENSDARG00000058180	exoc3l4	13: 7387822 ~ 7414096 (+)
ENSDARG00000070475	khdrbs1b	19: 30348676 ~ 30359059 (-)
ENSDARG00000001769	ptpra	21: 15756549 ~ 15816317 (+)
ENSDARG00000044694	fybb	21: 19844195 ~ 19866351 (+)
ENSDARG00000015971	rapgef1b	21: 4116437 ~ 4219783 (+)
ENSDARG00000014324	sh2d5	11: 37638873 ~ 37651879 (+)
ENSDARG00000076120	foxp4	11: 21910343 ~ 22094392 (+)
ENSDARG00000041982	adamts6	10: 11593998 ~ 11761927 (-)
ENSDARG00000098686	tmprss2	10: 38708099 ~ 38729185 (+)
ENSDARG00000042726	grb7	24: 36414829 ~ 36442590 (+)
ENSDARG00000091835	si:ch73-264p11.1	24: 25191415 ~ 25205140 (+)
ENSDARG00000074670	matk	22: 5036179 ~ 5054773 (-)
ENSDARG00000062080	shc2	22: 21317597 ~ 21351469 (+)
ENSDARG00000089131	il17rel	25: 29472361 ~ 29497002 (+)
ENSDARG00000013397	bnip2	25: 34246625 ~ 34268439 (+)
--	scarb2	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos	NA	NA	NA
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000027807

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences