Fish Single-cell RNA Database

GENE ID: ENSDARG00000056774

Symbol	Location	Gene type	Genome version	Species
gpr37l1b	8: 21265263 ~ 21268303 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000056774 (gpr37l1b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000077167	nmbb	7: 30085149 ~ 30087048 (-)
ENSDARG00000003754	tspan2a	6: 49107048 ~ 49159207 (-)
ENSDARG00000058780	slc9a2	9: 6963039 ~ 6991650 (-)
ENSDARG00000102888	gpr39	9: 56422311 ~ 56426047 (+)
ENSDARG00000075134	adgrf11	20: 35517572 ~ 35536676 (-)
ENSDARG00000086445	adgrf7	20: 35551636 ~ 35557902 (-)
ENSDARG00000043569	dram2a	8: 12975963 ~ 12989137 (+)
ENSDARG00000058666	dennd2da	8: 12989372 ~ 13029297 (-)
ENSDARG00000056774	gpr37l1b	8: 21265263 ~ 21268303 (-)
ENSDARG00000042552	cacna1sb	8: 25767610 ~ 25808403 (+)
ENSDARG00000041617	nme5	14: 6954579 ~ 6961746 (+)
ENSDARG00000013968	psap	13: 5004924 ~ 5028964 (+)
ENSDARG00000068144	nmba	18: 26784968 ~ 26785861 (-)
ENSDARG00000035882	rida	19: 32822269 ~ 32884513 (+)
ENSDARG00000059202	tspan2b	23: 423351 ~ 452365 (-)
ENSDARG00000030250	dennd2db	22: 835728 ~ 856886 (+)
ENSDARG00000044241	dram2b	22: 856869 ~ 866196 (-)
ENSDARG00000029457	cacna1sa	22: 912450 ~ 968484 (-)
ENSDARG00000045383	gpr22b	25: 3378135 ~ 3393705 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	Muller glia cells (cluster: 13)	potential marker	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Brain ventricular zone cells (cluster: 17)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000056774

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences